# hmmscan :: search sequence(s) against a profile database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query sequence file: AA/23726_FusoPortal_Gene_50.faa # target HMM database: Pfam-A.hmm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: 23726_FusoPortal_Gene_50 [L=432] Description: # 63512 # 64807 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.356 Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3e-18 66.4 1.1 4.5e-08 33.0 0.1 2.2 2 DAO FAD dependent oxidoreductase 1.1e-10 41.4 0.1 1.6e-10 40.9 0.1 1.2 1 FAD_oxidored FAD dependent oxidoreductase 4.4e-10 39.1 7.7 1.9e-06 27.2 4.8 2.6 3 FAD_binding_2 FAD binding domain 4.4e-10 39.2 0.5 1.5e-07 30.9 0.1 2.2 2 Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase 1.6e-07 30.9 5.2 1e-06 28.2 3.0 2.4 2 FAD_binding_3 FAD binding domain 2.3e-07 29.8 2.2 7.9e-07 28.0 2.2 1.7 1 HI0933_like HI0933-like protein 3.5e-07 29.3 1.8 0.00065 18.6 0.0 2.1 2 Trp_halogenase Tryptophan halogenase 1.8e-06 27.3 0.5 0.00031 20.0 0.1 2.4 2 Thi4 Thi4 family 1.9e-06 27.9 0.8 4.2e-06 26.8 0.8 1.6 1 NAD_binding_8 NAD(P)-binding Rossmann-like domain 4.3e-06 26.0 4.8 5.9e-05 22.2 1.5 2.7 3 GIDA Glucose inhibited division protein A 6.6e-06 26.5 1.1 0.00029 21.2 0.5 2.5 2 Pyr_redox Pyridine nucleotide-disulphide oxidoreductase 3.2e-05 23.4 0.2 0.008 15.5 0.1 2.2 2 GMC_oxred_N GMC oxidoreductase 0.00054 18.5 0.1 0.0093 14.4 0.0 2.1 2 GDI GDP dissociation inhibitor 0.0031 16.5 3.0 0.012 14.5 1.9 1.9 2 Lycopene_cycl Lycopene cyclase protein 0.0053 15.9 3.4 0.015 14.4 3.2 1.8 2 Pyr_redox_3 Pyridine nucleotide-disulphide oxidoreductase ------ inclusion threshold ------ 0.054 13.3 0.0 0.22 11.3 0.0 1.9 2 TP_methylase Tetrapyrrole (Corrin/Porphyrin) Methylases 0.12 11.6 2.9 0.83 8.8 0.3 2.8 3 Amino_oxidase Flavin containing amine oxidoreductase Domain annotation for each model (and alignments): >> DAO FAD dependent oxidoreductase # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 33.0 0.1 4.6e-11 4.5e-08 1 48 [. 7 54 .. 7 94 .. 0.80 2 ! 32.3 0.1 7.3e-11 7.2e-08 149 351 .. 112 330 .. 104 331 .. 0.64 Alignments for each domain: == domain 1 score: 33.0 bits; conditional E-value: 4.6e-11 EEEEECTSHHHHHHHHHHHHTT..EEEEESSSSTTSSGGGSSEEEEESSS CS DAO 1 dvviiGGGiiGlstAyeLarrg..VtllekgdiagsgaSgrnsgllhsgl 48 d +i+GGG +G+s+A La +g V+++e+g +++ ga ++g l+++ 23726_FusoPortal_Gene_50 7 DAIIVGGGLAGCSAAIVLANAGlaVLVVERG-DFC-GAKNMTGGRLYGHS 54 789****************************.888.99999999998855 PP == domain 2 score: 32.3 bits; conditional E-value: 7.3e-11 HHHHHHHHHHTT-EEEESECEEEEEEEETCEEEEEEECTEEE.EEEEEEEE--GGGHHHHHTT...CTT.TSEEEEEEEEEEEE. CS DAO 149 taalaraaealGveilegtevtgleeedgkvwgverttpgen.daadavVnaaGawsdllgll...kel.dlpispvrgqvlvl. 227 ++la++ae++G+ei+ g v +l edgkv+gv +t ge+ ad v++a G+ s l++ l kel ++++ +v+ l 23726_FusoPortal_Gene_50 112 DRWLASKAEEAGAEIIPGILVDELIVEDGKVVGV-SAT-GEElY-ADVVILADGVNSLLAQSLgmkKELePHQVAVGAKEVIKLg 193 589********************98999******.555.66645.5**********95444444545554355544555555552 PP EECCTHSTGSGCSEEEEE............EEETTTTEEEEEETTSEEEEEESSEEETTCSSTSCSHHHHHHHHHHHHHHS...G CS DAO 228 kplseklvspaailpvpe............tdddgrgvyvtprkdgrvlvGgtadeesgdddpevdeedidellealrklf...P 297 + + + + ++v t +++g ++ k ++v vG a + d ++ i++ll++ +++ P 23726_FusoPortal_Gene_50 194 EDVIN------QRFAVNNgegvawlscgdpTLGGFGGGLLYTNK-DSVSVGVVA----TLSDIGHSDLSINQLLDRFKEHPaiaP 267 11111......122222222333355555455555555555554.667777765....333445566788889998888874445 PP GG.CGEEEEEEE.........EEE.E.TTSSEEEEEEETEEEEEEEEECTTTHHHHHHHHHHHHHH CS DAO 298 ql.gdvlrkwaG.........lrp.l.pdglpligetpgvkglylatGhsghGltlapatGkllae 351 l g + +++G + p l +dg + g g+ ++ G+ +G+ +a+ +G+l+ae 23726_FusoPortal_Gene_50 268 YLeGGTSIEYSGhlvpeeglhMVPeLyRDGVLVTGD---AAGFCINLGFTVRGMDFAIESGRLAAE 330 554334457887533333333444424677777777...58***********************98 PP >> FAD_oxidored FAD dependent oxidoreductase # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 40.9 0.1 1.6e-13 1.6e-10 1 140 [. 7 158 .. 7 170 .. 0.78 Alignments for each domain: == domain 1 score: 40.9 bits; conditional E-value: 1.6e-13 FAD_oxidored 1 DvvVvGGgpaGvaAAiaAaraGakvlLveergvlG......Glltsglvatdignkaee.qvvtgiareflerlrqrgga..... 73 D ++vGGg+aG+ AAi a+aG vl+ve+ +++G G l + + +i n aee + ++i re ++ + ++ + 23726_FusoPortal_Gene_50 7 DAIIVGGGLAGCSAAIVLANAGLAVLVVERGDFCGaknmtgGRLYGHSLEKIIPNFAEEaPIERKITREKISLMSEDSSLdigfg 91 679**************************99988622111155555555566666666689*************88666645443 PP FAD_oxidored 74 rlkkrskwn..tfepevakavleeml....aeagvtvllntrlvevekegkriesvtveskegrktirAkvfi 140 + k+ + n +v++++++ +l +eag +++ + ++e ++e++++ +v + ++++ A+v+i 23726_FusoPortal_Gene_50 92 S--KKLSSNneNASYTVLRSTFDRWLaskaEEAGAEIIPGILVDELIVEDGKVVGVSAT----GEELYADVVI 158 2..2222212369999*************999*****************99*****995....6777777776 PP >> FAD_binding_2 FAD binding domain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.2 4.8 1.9e-09 1.9e-06 1 33 [. 7 39 .. 7 49 .. 0.92 2 ! 11.8 0.0 8.9e-05 0.087 147 194 .. 115 162 .. 110 192 .. 0.73 3 ? -1.7 0.0 1.1 1.1e+03 86 118 .. 283 318 .. 279 423 .. 0.61 Alignments for each domain: == domain 1 score: 27.2 bits; conditional E-value: 1.9e-09 SEEEE--SHHHHHHHHHHHHTTT-EEEEESSSG CS FAD_binding_2 1 DviViGsGlAGLaAAleaaeaGlkvavvekeqe 33 D+i++G+GlAG++AA+ +a+aGl v+vve ++ 23726_FusoPortal_Gene_50 7 DAIIVGGGLAGCSAAIVLANAGLAVLVVERGDF 39 89***************************9875 PP == domain 2 score: 11.8 bits; conditional E-value: 8.9e-05 HHHHHHTCTEEEEESEEEEEEEECTTEEEEEEEEETTTTCEEEEEESE CS FAD_binding_2 147 lvesarkagvdfqerteadeLivedgrvtGavvenpesgrevriraka 194 l+ +a++ag ++ + + +deLivedg+v+G+ ++ +e +v i a++ 23726_FusoPortal_Gene_50 115 LASKAEEAGAEIIPGILVDELIVEDGKVVGVSATGEELYADVVILADG 162 67889999**********************999855544455555443 PP == domain 3 score: -1.7 bits; conditional E-value: 1.1 HHTHHHHHHHHHHTT----BCCTS.......SB-EEE-TT CS FAD_binding_2 86 veaapeavdeLeelgvpfsrtedg.......pvdvrelGg 118 e++ ++v eL + gv +++++ g + +G 23726_FusoPortal_Gene_50 283 PEEGLHMVPELYRDGVLVTGDAAGfcinlgfT----VRGM 318 56777788888888888888555455433221....2222 PP >> Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 30.9 0.1 1.5e-10 1.5e-07 2 89 .. 7 101 .. 6 108 .. 0.80 2 ! 6.7 0.1 0.0036 3.6 179 236 .. 107 164 .. 100 177 .. 0.86 Alignments for each domain: == domain 1 score: 30.9 bits; conditional E-value: 1.5e-10 SEEEE--SHHHHHHHHHHHHHTS-EEEEE.........TTHHHHHHSHHHHHHHHHHHHHHHEHHHHHHHHH.HHHHHHHTTEEE CS xxxxxxxxxxxxxxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxx RF Pyr_redox_2 2 dvvviGgGpAGlaaaltlaqagakvtlve.........legtclnggcllskallgaaedaeievvkklnqg.ielllgeevvki 76 d +++GgG AG++aa+ la+ag+ v++ve +g l+g +l k++ ++ae+a ie k++ + i l+ +++ ++i 23726_FusoPortal_Gene_50 7 DAIIVGGGLAGCSAAIVLANAGLAVLVVErgdfcgaknMTGGRLYG-HSLEKIIPNFAEEAPIER--KITREkISLMSEDSSLDI 88 789*************************877888666555555555.6778**********9954..455554999999889999 PP EECEEEEEETCEE CS xxxxxxxxxxxxx RF Pyr_redox_2 77 dpgkkkvklekkk 89 +g+kk+ ++++ 23726_FusoPortal_Gene_50 89 GFGSKKLSSNNEN 101 9999999986654 PP == domain 2 score: 6.7 bits; conditional E-value: 0.0036 S-HHHHHHHHHHHHHTTEEEEETCEEEEEEECTCCEEEEETTSCEEEESEEEE-S-EE CS xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RF Pyr_redox_2 179 ldkelsaalekalekeGvevklgtsvkeidgngeklevvlkdgeeieadlvvvavGvr 236 l + + ++l+ + e+ G e+ g v e++ ++ k+ v +gee+ ad v++a Gv 23726_FusoPortal_Gene_50 107 LRSTFDRWLASKAEEAGAEIIPGILVDELIVEDGKVVGVSATGEELYADVVILADGVN 164 55778899999*******************999988899999*************985 PP >> FAD_binding_3 FAD binding domain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.2 3.0 1e-09 1e-06 2 186 .. 6 179 .. 5 196 .. 0.72 2 ? -3.5 0.0 4.5 4.4e+03 289 300 .. 294 305 .. 289 306 .. 0.81 Alignments for each domain: == domain 1 score: 28.2 bits; conditional E-value: 1e-09 EEEEEE--SHHHHHHHHHHHHTTHHEEEEESSSSS.CCSS.....S--EEEHHHHHHHHHTT-HHHHHHHSEECCCCEEEEEEEC CS FAD_binding_3 2 tdVlIVGaGpaGlmlallLseaGvrvvlvekhstt.vvlp.....rAdglnqrtmellrqlGledrilaegapnelmgealynel 80 d +IVG+G+aG ++a +L++aG v++ve+ + +++ ++ l++ + +++ +e++i +e +lm+e + + 23726_FusoPortal_Gene_50 6 FDAIIVGGGLAGCSAAIVLANAGLAVLVVERGDFCgAKNMtggrlYGHSLEKIIPNFAEEAPIERKITREK--ISLMSEDSSLD- 87 5889***************************7643133331122235555555555667777777777777..44444444444. PP CCCCTTCCSCEEEEEHHCHHCST-CEE--HHHHHHHHHHHHHHHTEEETSSEEEECCEECCCCCCCEEEECCTTEEEEEEEEEEE CS FAD_binding_3 81 sdtrikverpkaradlelesspervtvypqteleriLvehaeerglqvrfktevlsleqdeegvtavvrdketgeeetvrakYlv 165 + +l+ + ++ +++ + ++r L+++aee+g+++ + v l ++ +v v ++tgee + a+ ++ 23726_FusoPortal_Gene_50 88 --------IGFGSKKLS-SNNENASYTVLRSTFDRWLASKAEEAGAEIIPGILVDELIVEDGKV---VGVSATGEE--LYADVVI 158 ........224455555.45556667777899******************99999888777774...445666766..******* PP E--GTT-HHHHHHTGGEEEEE CS FAD_binding_3 166 GaDGgrStvrktlgiefegee 186 aDG++S +++lg++ e e 23726_FusoPortal_Gene_50 159 LADGVNSLLAQSLGMKKELEP 179 **************9866554 PP == domain 2 score: -3.5 bits; conditional E-value: 4.5 EETTEEE-GGGT CS FAD_binding_3 289 rkgrvflaGDAa 300 ++ v++ GDAa 23726_FusoPortal_Gene_50 294 YRDGVLVTGDAA 305 5688*******8 PP >> HI0933_like HI0933-like protein # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.0 2.2 8.1e-10 7.9e-07 2 167 .. 7 166 .. 6 177 .. 0.87 Alignments for each domain: == domain 1 score: 28.0 bits; conditional E-value: 8.1e-10 SEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSS-HHHHHCGGGT-EEEETT-SGGGEEES...STTTTHHHHHHS-HHHHHHHH CS HI0933_like 2 dviviGgGaAGlmaAisaakrgakVlllekakklgrKilisGgGrcNvTnlseepeellsrypenpkflksalsrftnedlialv 86 d i++GgG AG aAi +a++g Vl++e+++ g K ++G Gr+ l++ +++++++ p ++k ++ +s +++ +++ 23726_FusoPortal_Gene_50 7 DAIIVGGGLAGCSAAIVLANAGLAVLVVERGDFCGAK-NMTG-GRLYGHSLEKIIPNFAEEAPIERKITREKISLMSEDSSLDIG 89 89***********************************.5666.78888888999********************99999988864 PP HHTT--EEE-STTEEEETT.-CHHHHHHHHHHHHHHT-EEE-S--EEEEECETTE.EEEEE.TTEEEEESEEEE----SS- CS HI0933_like 87 eelgvklkeedsgrlFpvsdkaedivdallkelkeagvklrletevksvekeedgkfrvktkseeeleadklvlAtGGkSv 167 kl +++ ++v ++ + l ++++eag ++ v ++ e+++++ v++ ++eel ad ++lA G +S+ 23726_FusoPortal_Gene_50 90 FGS-KKLSSNNENASYTVL--RSTFDRWLASKAEEAGAEIIPGILVDELIVEDGKVVGVSA-TGEELYADVVILADGVNSL 166 333.355566666667777..346679999*******************************.9************998885 PP >> Trp_halogenase Tryptophan halogenase # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 9.0 1.6 0.00055 0.54 3 34 .. 9 37 .. 7 42 .. 0.90 2 ! 18.6 0.0 6.6e-07 0.00065 142 216 .. 97 170 .. 60 181 .. 0.85 Alignments for each domain: == domain 1 score: 9.0 bits; conditional E-value: 0.00055 EEE--SHHHHHHHHHHHHHTTTSSEEEEEE-S CS Trp_halogenase 3 vivGGGtaGwlaAaalakalkgklevtlvese 34 +ivGGG aG aA++la+a+ l+v++ve 23726_FusoPortal_Gene_50 9 IIVGGGLAGCSAAIVLANAG---LAVLVVERG 37 7******************9...99**99975 PP == domain 2 score: 18.6 bits; conditional E-value: 6.6e-07 -B-S--EEEE-HHHHHHHHHHHHHHCT-EEEE--EEEEEE-TTS-EEEEEETTS-EEE-SEEEE-SGGG-IIIII CS Trp_halogenase 142 lsalsyAyhldaalyakfLrrvaearGvtrvegkvvevqldedgrveslrledgreveadlfiDcsGfrgllieq 216 +++ + +y + ++ ++++L ae++G +++ g v+ + edg+v ++ +g+e+ ad +i + G ++ll ++ 23726_FusoPortal_Gene_50 97 SNNENASYTVLRSTFDRWLASKAEEAGAEIIPGILVDELIVEDGKVVGVSA-TGEELYADVVILADGVNSLLAQS 170 445578999****************************************98.7889**************99765 PP >> Thi4 Thi4 family # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 20.0 0.1 3.2e-07 0.00031 18 65 .. 6 52 .. 3 76 .. 0.91 2 ! 5.3 0.0 0.0093 9.1 98 135 .. 110 145 .. 92 166 .. 0.80 Alignments for each domain: == domain 1 score: 20.0 bits; conditional E-value: 3.2e-07 EEEEEE--SHHHHHHHHHHHHCTTS-EEEEESSSS--TTTTTTSTTBS CS Thi4 18 sDvvivGaGssGLtaayylakkpdlkvailersvspGGGawlGGqlfs 65 D +ivG+G +G +aa +la++ +l v+++er G GG+l+ 23726_FusoPortal_Gene_50 6 FDAIIVGGGLAGCSAAIVLANA-GLAVLVVERGDFCGAKNMTGGRLYG 52 599******************9.*********9999999999999885 PP == domain 2 score: 5.3 bits; conditional E-value: 0.0093 HHHHHHHHHHHTSTTEEEEESEEEEEEEEETBTEEEEE CS Thi4 98 lftstllskvlqlanvkllnavaveDlivregegvaGv 135 f l+sk+ + a++ ++ ++ v++liv + +v Gv 23726_FusoPortal_Gene_50 110 TFDRWLASKAEE-AGAEIIPGILVDELIVED-GKVVGV 145 466778999988.*****************9.567777 PP >> NAD_binding_8 NAD(P)-binding Rossmann-like domain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.8 0.8 4.2e-09 4.2e-06 1 34 [. 10 43 .. 10 62 .. 0.89 Alignments for each domain: == domain 1 score: 26.8 bits; conditional E-value: 4.2e-09 EE--SHHHHHHHHHHHCCTEEEEEE-SSSSSSGG CS NAD_binding_8 1 IVGaGlsGlaaAylLakagfdvllfekrdrlGGr 34 IVG+Gl+G++aA La+ag+ vl++e++d +G + 23726_FusoPortal_Gene_50 10 IVGGGLAGCSAAIVLANAGLAVLVVERGDFCGAK 43 9****************************99964 PP >> GIDA Glucose inhibited division protein A # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.2 1.5 6e-08 5.9e-05 1 30 [. 7 35 .. 7 60 .. 0.82 2 ? 4.1 0.0 0.02 19 118 150 .. 132 163 .. 99 201 .. 0.80 3 ? -2.0 0.0 1.4 1.4e+03 29 62 .. 203 238 .. 184 246 .. 0.76 Alignments for each domain: == domain 1 score: 22.2 bits; conditional E-value: 6e-08 CEEEE-SSHHHHHHHHHHHHTT--EEEEES CS GIDA 1 dviViGgGhAGceAAlaaarlGakvlLith 30 d i++GgG+AGc AA+ +a++G+ vl + + 23726_FusoPortal_Gene_50 7 DAIIVGGGLAGCSAAIVLANAGLAVLVV-E 35 579**********************988.3 PP == domain 2 score: 4.1 bits; conditional E-value: 0.02 EEEEEECTTEEEEEEETTS-EEEECEEEE--TT CS GIDA 118 veeliveekkvkgvvtedgetikakavviatGt 150 v+elive++kv gv ++ge++ a++v++a G 23726_FusoPortal_Gene_50 132 VDELIVEDGKVVGVS-ATGEELYADVVILADGV 163 889**********97.57888999******997 PP == domain 3 score: -2.0 bits; conditional E-value: 1.4 ES-GGGTT--SS.SSEEE-TTHHHHHHHHHHHT.-S CS GIDA 29 thkldtiaelsC.npsiggiakgllvrEidalg.gl 62 +++ + +a+lsC p++gg + gll + d + g+ 23726_FusoPortal_Gene_50 203 VNNGEGVAWLSCgDPTLGGFGGGLLYTNKDSVSvGV 238 678889999***558999999999988777666555 PP >> Pyr_redox Pyridine nucleotide-disulphide oxidoreductase # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.2 0.5 3e-07 0.00029 2 34 .. 8 40 .. 7 60 .. 0.88 2 ? 3.2 0.0 0.12 1.2e+02 41 78 .. 110 147 .. 100 151 .. 0.87 Alignments for each domain: == domain 1 score: 21.2 bits; conditional E-value: 3e-07 EEEECSSHHHHHHHHHHHHTTSEEEEEESSSSS CS Pyr_redox 2 vvvvGgGyiglElAgalaelgkkVtvversdkl 34 +++vGgG+ g+ +A +la+ g V vver+d 23726_FusoPortal_Gene_50 8 AIIVGGGLAGCSAAIVLANAGLAVLVVERGDFC 40 58***************************9865 PP == domain 2 score: 3.2 bits; conditional E-value: 0.12 HHHHHHHHHHHHTTEEEECSEEEEEEEEETTSEEEEEE CS Pyr_redox 41 easkilqeklekngievllntkveeiegsedgvesvkl 78 ++ ++l+ k e+ g e++ + v e+ ++ +v +v 23726_FusoPortal_Gene_50 110 TFDRWLASKAEEAGAEIIPGILVDELIVEDGKVVGVSA 147 67899**********************99988888865 PP >> GMC_oxred_N GMC oxidoreductase # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 5.9 0.0 0.0066 6.5 1 33 [. 6 37 .. 6 70 .. 0.81 2 ! 15.5 0.1 8.1e-06 0.008 192 280 .. 108 183 .. 91 195 .. 0.83 Alignments for each domain: == domain 1 score: 5.9 bits; conditional E-value: 0.0066 GMC_oxred_N 1 vdelveggGsagsvvAaRLsedpstsvlvleag 33 +d++++ggG+ag+ A L++ vlv+e g 23726_FusoPortal_Gene_50 6 FDAIIVGGGLAGCSAAIVLANA-GLAVLVVERG 37 699***********66666665.5667777766 PP == domain 2 score: 15.5 bits; conditional E-value: 8.1e-06 GMC_oxred_N 192 qstarawLrpalerpnleiltgakaekiilegrkkravGVeasdkkgtvkrlvvaakevvvaaGalnsPqlLqrSGlGkaehLke 276 +st + wL e+ ++ei+ g+ ++ +i+e ++++vGV+a+ ++ a++v++a G +ns lL +S lG++++L++ 23726_FusoPortal_Gene_50 108 RSTFDRWLASKAEEAGAEIIPGILVDELIVE--DGKVVGVSATGEELY-------ADVVILADG-VNS--LLAQS-LGMKKELEP 179 688999******999****************..*******99876655.......566666666.454..77777.778888888 PP GMC_oxred_N 277 vgvd 280 ++v 23726_FusoPortal_Gene_50 180 HQVA 183 8876 PP >> GDI GDP dissociation inhibitor # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.4 0.0 9.5e-06 0.0093 2 43 .. 3 44 .. 1 74 [. 0.90 2 ? 1.7 0.0 0.067 66 254 281 .. 132 158 .. 122 166 .. 0.84 Alignments for each domain: == domain 1 score: 14.4 bits; conditional E-value: 9.5e-06 XXEECEEEE--SHHHHHHHHHHHHTT--EEEE-SSSSSCGGG CS GDI 2 deeydvivlGtGlkecilsGllsvdgkkvlhldrndyyGges 43 +e++d+i++G Gl c + +l+ g vl+++r d+ G++ 23726_FusoPortal_Gene_50 3 EEKFDAIIVGGGLAGCSAAIVLANAGLAVLVVERGDFCGAKN 44 578***********************************9875 PP == domain 2 score: 1.7 bits; conditional E-value: 0.067 ECEEEE-TTS-EEEEEETTEEEEECEEE CS GDI 254 vdevvldedgkvvGvkseeevakakkvi 281 vde+++ edgkvvGv + +e +a+ vi 23726_FusoPortal_Gene_50 132 VDELIV-EDGKVVGVSATGEELYADVVI 158 456666.9*********99999999887 PP >> Lycopene_cycl Lycopene cyclase protein # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.5 1.9 1.3e-05 0.012 1 34 [. 7 38 .. 7 49 .. 0.91 2 ? 0.8 0.0 0.19 1.9e+02 84 145 .. 106 167 .. 90 187 .. 0.72 Alignments for each domain: == domain 1 score: 14.5 bits; conditional E-value: 1.3e-05 Lycopene_cycl 1 DvvviGaGpAglslAarlteakpglkvvlieasp 34 D +++G+G+Ag+s A l a++gl+v+++e ++ 23726_FusoPortal_Gene_50 7 DAIIVGGGLAGCSAAIVL--ANAGLAVLVVERGD 38 789***************..**********9887 PP == domain 2 score: 0.8 bits; conditional E-value: 0.19 Lycopene_cycl 84 vsskrlkeellerlvengvklleakvesveeeeageslvvleggrkirarlvvdarglaslk 145 v ++ + + l+ + e+g++ + +e+g+++ v + g++++a +v+ a g+ sl 23726_FusoPortal_Gene_50 106 VLRSTFDRWLASKAEEAGAEIIPGILVDELIVEDGKVVGVSATGEELYADVVILADGVNSLL 167 555666666777766777766666544444456678999999***************76654 PP >> Pyr_redox_3 Pyridine nucleotide-disulphide oxidoreductase # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.4 3.2 1.5e-05 0.015 1 31 [. 9 38 .. 9 43 .. 0.94 2 ? -1.6 0.0 1.2 1.2e+03 110 133 .. 139 162 .. 78 169 .. 0.77 Alignments for each domain: == domain 1 score: 14.4 bits; conditional E-value: 1.5e-05 Pyr_redox_3 1 iIiGaGPaGlaaaielkkagledylilEkgn 31 iI+G+G aG +aai l +agl +l++E+g 23726_FusoPortal_Gene_50 9 IIVGGGLAGCSAAIVLANAGL-AVLVVERGD 38 8********************.8******96 PP == domain 2 score: -1.6 bits; conditional E-value: 1.2 Pyr_redox_3 110 edegfevetsketyeAkkviiAtG 133 +++ v+++ e++ A+ vi+A G 23726_FusoPortal_Gene_50 139 DGKVVGVSATGEELYADVVILADG 162 445567888889999999999988 PP >> TP_methylase Tetrapyrrole (Corrin/Porphyrin) Methylases # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -1.5 0.0 1.8 1.8e+03 99 118 .. 115 130 .. 106 130 .. 0.63 2 ? 11.3 0.0 0.00022 0.22 26 100 .. 154 227 .. 153 243 .. 0.64 Alignments for each domain: == domain 1 score: -1.5 bits; conditional E-value: 1.8 TP_methylase 99 lvealrareagievevvPGv 118 l++++++ ag e++PG+ 23726_FusoPortal_Gene_50 115 LASKAEE--AG--AEIIPGI 130 3334444..44..9*****8 PP == domain 2 score: 11.3 bits; conditional E-value: 0.00022 TP_methylase 26 advvlgddsraleilldllaeeleleapmgkekepleqa........yeeiaeal......aealragkdVallvsGDPlvygtg 96 advv+ +d + ++l + l m+ke ep++ a + a+++g+ Va l+ GDP++ g g 23726_FusoPortal_Gene_50 154 ADVVILAD-GVNSLLAQSLG--------MKKELEPHQVAvgakevikL------GedvinqRFAVNNGEGVAWLSCGDPTLGGFG 223 78887777.68888876664........44454444444553333221......2222355677777777***********9999 PP TP_methylase 97 selv 100 + l+ 23726_FusoPortal_Gene_50 224 GGLL 227 8887 PP >> Amino_oxidase Flavin containing amine oxidoreductase # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.8 0.3 0.00085 0.83 1 29 [. 15 43 .. 15 57 .. 0.86 2 ? -0.7 0.0 0.61 6e+02 220 272 .. 121 179 .. 98 192 .. 0.72 3 ? 1.4 0.0 0.14 1.4e+02 434 451 .] 315 333 .. 305 333 .. 0.83 Alignments for each domain: == domain 1 score: 8.8 bits; conditional E-value: 0.00085 HHHHHHHHHHHHTTEEEEEEESSSSSBTT CS Amino_oxidase 1 laGLaaArqLlsaGfdVtvlEardrvGGR 29 laG +aA L++aG+ V+v+E d G + 23726_FusoPortal_Gene_50 15 LAGCSAAIVLANAGLAVLVVERGDFCGAK 43 6999*****************99987754 PP == domain 2 score: -0.7 bits; conditional E-value: 0.61 TTTEEEETSEEEEEEEEETTCEEEEETTSTEEEESEEEE-S-HHHHH......SSEEES CS Amino_oxidase 220 lrgldirlntrVkeikregdgvtvtledgevveaDaVvvTvplgvlk......ailfsP 272 + g +i + V e+ e+++v +ge++ aD V+++ ++ l +++++P 23726_FusoPortal_Gene_50 121 EAGAEIIPGILVDELIVEDGKVVGVSATGEELYADVVILADGVNSLLaqslgmKKELEP 179 56666666666777777777766667899*********998877776666665555555 PP == domain 3 score: 1.4 bits; conditional E-value: 0.14 TS.HHHHHHHHHHHHHHHH CS Amino_oxidase 434 gt.vegAilSGlraAaril 451 + ++ Ai+SG+ aA++++ 23726_FusoPortal_Gene_50 315 VRgMDFAIESGRLAAEAVI 333 555899**********997 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (432 residues searched) Target model(s): 16712 (2907032 nodes) Passed MSV filter: 327 (0.0195668); expected 334.2 (0.02) Passed bias filter: 281 (0.0168143); expected 334.2 (0.02) Passed Vit filter: 42 (0.00251316); expected 16.7 (0.001) Passed Fwd filter: 17 (0.00101723); expected 0.2 (1e-05) Initial search space (Z): 16712 [actual number of targets] Domain search space (domZ): 17 [number of targets reported over threshold] # CPU time: 0.30u 0.25s 00:00:00.55 Elapsed: 00:00:00.32 # Mc/sec: 3924.49 // [ok]