# hmmscan :: search sequence(s) against a profile database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query sequence file: AA/23726_FusoPortal_Gene_641.faa # target HMM database: Pfam-A.hmm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: 23726_FusoPortal_Gene_641 [L=301] Description: # 723887 # 724789 # 1 # ID=1_641;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.245 Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.4e-72 242.0 1.3 7.7e-72 241.7 1.3 1.0 1 IPPT IPP transferase 1.3e-11 44.3 0.9 1.5e-07 31.0 0.0 2.2 2 IPT Isopentenyl transferase 2.2e-05 24.9 2.5 0.0026 18.2 0.1 2.6 2 AAA_18 AAA domain 0.00099 19.2 0.2 0.0033 17.5 0.2 2.0 1 AAA_33 AAA domain 0.0011 19.3 0.2 0.0033 17.7 0.0 1.9 2 AAA ATPase family associated with various cellula 0.0012 18.5 0.0 0.002 17.8 0.0 1.6 1 Cytidylate_kin Cytidylate kinase 0.0024 17.8 1.6 0.078 12.9 0.0 2.4 2 ResIII Type III restriction enzyme, res subunit 0.0073 15.2 0.2 0.018 13.9 0.0 1.8 2 TIP49 TIP49 C-terminus ------ inclusion threshold ------ 0.02 15.2 0.0 0.044 14.1 0.0 1.6 1 RNA_helicase RNA helicase 0.022 14.9 0.4 0.12 12.6 0.4 2.2 1 AAA_22 AAA domain 0.022 13.7 0.5 1.1 8.2 0.2 2.3 2 T2SSE Type II/IV secretion system protein 0.025 14.4 0.9 0.8 9.5 0.2 2.4 2 RsgA_GTPase RsgA GTPase 0.027 14.1 0.1 0.069 12.8 0.0 1.8 2 IstB_IS21 IstB-like ATP binding protein 0.029 14.6 0.3 0.052 13.7 0.3 1.4 1 Hydin_ADK Hydin Adenylate kinase-like domain 0.07 13.1 2.2 0.21 11.6 2.2 2.0 1 CbiA CobQ/CobB/MinD/ParA nucleotide binding domain 0.099 12.6 2.9 0.13 12.2 0.1 2.4 2 AAA_14 AAA domain Domain annotation for each model (and alignments): >> IPPT IPP transferase # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 241.7 1.3 7.4e-75 7.7e-72 1 226 [. 37 274 .. 37 276 .. 0.95 Alignments for each domain: == domain 1 score: 241.7 bits; conditional E-value: 7.4e-75 TTBTT-HTTTT---HHHHTTS-EESSS-B-TTS.--HHHHHHHHHHHHHHHHHTT-EEEEEES-HHHHHHHHCTG-S-.B..HH CS IPPT 1 qvYrgmdIgTakptaeeragvphhlidildpdeeysvaeFqkdareaieeilargkipilvGGTglYlkallegldelpeadee 84 qvYrg++IgTak+ +ee++g++hhlidi++p +ysv++F+kd+++++++ + +k+ +lvGGTglYl+++++gl+ lpead++ 23726_FusoPortal_Gene_641 37 QVYRGLNIGTAKIREEEKEGIKHHLIDIVEPVLKYSVGNFEKDVNKILNQ--NSEKNFLLVGGTGLYLNSVTNGLSILPEADKK 118 9***********************************************87..99*********************778****** PP HHHHHHHHHHHSHHHHHHHHHHHC-HHHHTTS-TT-HHHHHHHHHHHHHHSS-HH............ECEEEEEECSHHHHHHH CS IPPT 85 lraeleeeaeeegkealheelkevdpeaaakihpndrqRiiRalevyeetgkpls............ellviglesdreelyer 156 +r+ l + +++al e ++d+ea ++ihpn+r R+ R +ev+ tg+++s ++l i+le++re+ly+r 23726_FusoPortal_Gene_641 119 TREYLTTL----NNQALLELALKYDEEATKEIHPNNRVRLERVVEVFLLTGQKFSelskkniknnnfKFLKIALERNRENLYDR 198 ***99994....4678***************************************99999999998888*****99******** PP HHHHHHHHHHTTHHHHHHHHHH......CCCCSTTSHHHHHHHTTSS-HHHHHHHHHHHHHHHHHHHHHHHHTTCC CS IPPT 157 ideRvdemleeGlleEveklla......salraigykelleylegelsleeaieklkaatrqyaKrQltWfrkkke 226 i++Rvd m+++Gl++Ev++l++ +l+ igy+e+++y++ ++sl+ea+ ++k ++r+yaKrQ tWf+ +ke 23726_FusoPortal_Gene_641 199 INKRVDIMFAQGLVDEVKNLYKiygdklYSLNIIGYNEIIDYINAKISLDEAVYQIKLNSRHYAKRQFTWFKADKE 274 *********************987775336******************************************9987 PP >> IPT Isopentenyl transferase # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 31.0 0.0 1.4e-10 1.5e-07 4 98 .. 5 97 .. 2 108 .. 0.77 2 ! 12.3 0.2 7.2e-05 0.075 105 189 .. 170 247 .. 104 262 .. 0.79 Alignments for each domain: == domain 1 score: 31.0 bits; conditional E-value: 1.4e-10 IPT 4 ylifGatttGKtaeaiklaketgapvivlDRvqcyselavgsGrpleeelegtrRiylddrslseGvidae.eanerLikevesyk 88 +i G+t++GKt+ +i lak+ a +i+ D q y l +g+ + eee eg++ +d + e v++ +e ++++ +++ 23726_FusoPortal_Gene_641 5 IVIAGPTGVGKTKISIDLAKKLNAEIISSDSAQVYRGLNIGTAKIREEEKEGIKHHLID---IVEPVLKYSvGNFEKDVNKILNQN 87 6899*********************************************9999877665...444444432133455555555555 PP IPT 89 deeglilEGG 98 +e++++l GG 23726_FusoPortal_Gene_641 88 SEKNFLLVGG 97 5555555555 PP == domain 2 score: 12.3 bits; conditional E-value: 7.2e-05 IPT 105 rmakdeywnadfewevkrlrlpdedvflakakkRvrqmlrpeeegaslldElaelwkepkarailedidGyryildyarkkkvt 188 +++k++ n +f++ l+ +++ ++ kRv m++ +l+dE+++l+k + +i Gy+ i+dy ++k ++ 23726_FusoPortal_Gene_641 170 ELSKKNIKNNNFKFLKIALE-RNRENLYDRINKRVDIMFAQ-----GLVDEVKNLYKIYGDKLYSLNIIGYNEIIDYINAK-IS 246 55666666667766444444.45666779999999999987.....9******************************9875.44 PP IPT 189 i 189 + 23726_FusoPortal_Gene_641 247 L 247 4 PP >> AAA_18 AAA domain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.2 0.1 2.5e-06 0.0026 1 34 [. 5 38 .. 5 105 .. 0.83 2 ? 6.1 0.4 0.013 14 91 114 .. 175 203 .. 114 208 .. 0.67 Alignments for each domain: == domain 1 score: 18.2 bits; conditional E-value: 2.5e-06 AAA_18 1 IlltGtpGvGKttlareLskrlgfgvnlrdvake 34 I+++G++GvGKt ++ L+k+l+ ++++d a+ 23726_FusoPortal_Gene_641 5 IVIAGPTGVGKTKISIDLAKKLNAEIISSDSAQV 38 99*******************9876655555544 PP == domain 2 score: 6.1 bits; conditional E-value: 0.013 AAA_18 91 akdikk........vvLtaspeelleRlekRg 114 ++ k + L+ + e l++R++kR 23726_FusoPortal_Gene_641 175 NI---KnnnfkflkIALERNRENLYDRINKRV 203 33...133367777****************95 PP >> AAA_33 AAA domain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.5 0.2 3.1e-06 0.0033 2 33 .. 5 38 .. 5 214 .. 0.82 Alignments for each domain: == domain 1 score: 17.5 bits; conditional E-value: 3.1e-06 AAA_33 2 vllvGlpGsGKstlaerllkklgavllssdt..l 33 +++ G+ G+GK+ + l+kkl a+++ssd+ + 23726_FusoPortal_Gene_641 5 IVIAGPTGVGKTKISIDLAKKLNAEIISSDSaqV 38 5789**************************9441 PP >> AAA ATPase family associated with various cellular activities (AAA) # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.7 0.0 3.2e-06 0.0033 2 57 .. 6 91 .. 5 102 .. 0.85 2 ? -2.1 0.0 4.3 4.5e+03 23 35 .. 180 192 .. 144 211 .. 0.53 Alignments for each domain: == domain 1 score: 17.7 bits; conditional E-value: 3.2e-06 EEESSTTSSHHHHHHHHHHHHTHEEEEEETTTCCSS..............................STTHHHHHHHHHHHHHHHTS CS AAA 2 llyGppGtGKTllakavakelgvefleisgsellsk..............................yvgesekkirelfkeakeka 57 ++ Gp G+GKT + +ak+l++e+++ + +++ vg+ ek++++++++ +ek+ 23726_FusoPortal_Gene_641 6 VIAGPTGVGKTKISIDLAKKLNAEIISSDSAQVYRGlnigtakireeekegikhhlidivepvlkySVGNFEKDVNKILNQNSEKN 91 689*******************9999999888885578888888888899999999999999999889999999999998876665 PP == domain 2 score: -2.1 bits; conditional E-value: 4.3 THEEEEEETTTCC CS AAA 23 gvefleisgsell 35 +++fl+i + + + 23726_FusoPortal_Gene_641 180 NFKFLKIALERNR 192 2333333333333 PP >> Cytidylate_kin Cytidylate kinase # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.8 0.0 1.9e-06 0.002 1 39 [. 5 45 .. 5 183 .. 0.82 Alignments for each domain: == domain 1 score: 17.8 bits; conditional E-value: 1.9e-06 EEEE-STTSSHHHHHHHHHHHHT-EEE..EHHHHHHHHHHH CS Cytidylate_kin 1 iaiDGPagsGKssvaralaeklglkyl..dtgalYRalala 39 i i GP+g GK ++ la+kl+++++ d++++YR l 23726_FusoPortal_Gene_641 5 IVIAGPTGVGKTKISIDLAKKLNAEIIssDSAQVYRGLNIG 45 6799*********************993346789*987543 PP >> ResIII Type III restriction enzyme, res subunit # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.9 0.0 7.4e-05 0.078 24 50 .. 2 28 .. 1 41 [. 0.90 2 ? 3.6 0.5 0.054 56 78 163 .. 135 247 .. 78 250 .. 0.57 Alignments for each domain: == domain 1 score: 12.9 bits; conditional E-value: 7.4e-05 TSEEEEEESTTSTHHHHHHHHHHHH-S CS ResIII 24 dkrglikmaTGtGKTlvaaklierllk 50 +k ++i+ +TG+GKT +++ l+++l 23726_FusoPortal_Gene_641 2 NKAIVIAGPTGVGKTKISIDLAKKLNA 28 57889*****************99875 PP == domain 2 score: 3.6 bits; conditional E-value: 0.054 TGG....GEEEESSS-B--.......-SEEEEEHHHHHHTH.......................HHHTTT-S........EEEE CS ResIII 78 lseaykeigkkvsgdkkkakekdstnkkilvttiqsldadseee...............eeeseellrdrfd........viii 138 + ++++e++k+++ +++ + + ++++ t q++++ s+++ ++e+ l dr++ ++ 23726_FusoPortal_Gene_641 135 ALKYDEEATKEIHPNNRVR---LERVVEVFLLTGQKFSELSKKNiknnnfkflkialerNREN---LYDRINkrvdimfaQGLV 212 2222222445555555544...67777888888888888886667777777777765432222...222222334666666688 PP ETGGGTTS....T.......TTHHHHHT---SEEE CS ResIII 139 DEaHrlgak...k.......swreilekfkeavll 163 DE+ +l++ k ++ei++++++++ l 23726_FusoPortal_Gene_641 213 DEVKNLYKIygdKlyslniiGYNEIIDYINAKISL 247 99888888555415556677899999998887766 PP >> TIP49 TIP49 C-terminus # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.9 0.0 1.7e-05 0.018 51 78 .. 3 30 .. 1 71 [. 0.87 2 ? -2.3 0.0 1.5 1.5e+03 236 271 .. 128 163 .. 123 171 .. 0.79 Alignments for each domain: == domain 1 score: 13.9 bits; conditional E-value: 1.7e-05 TIP49 51 ravLlaGpsgtGktalaiaiskelgedv 78 +a+++aGp+g Gkt ++i ++k+l++++ 23726_FusoPortal_Gene_641 3 KAIVIAGPTGVGKTKISIDLAKKLNAEI 30 89**********************9876 PP == domain 2 score: -2.3 bits; conditional E-value: 1.5 TIP49 236 pqdllslllqllkgkkteiteklReeinkkvakyve 271 +q ll l l++ + ++ei+ + R +++++v+ ++ 23726_FusoPortal_Gene_641 128 NQALLELALKYDEEATKEIHPNNRVRLERVVEVFLL 163 466777778888999999999999999999987765 PP >> RNA_helicase RNA helicase # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 14.1 0.0 4.2e-05 0.044 1 36 [. 5 40 .. 5 56 .. 0.87 Alignments for each domain: == domain 1 score: 14.1 bits; conditional E-value: 4.2e-05 RNA_helicase 1 iwlyGpsgeGKStlakeLakallkklklkkkdsvys 36 i++ Gp+g+GK+ ++ +Lak+l ++ + + +vy 23726_FusoPortal_Gene_641 5 IVIAGPTGVGKTKISIDLAKKLNAEIISSDSAQVYR 40 7899*******************9997777777775 PP >> AAA_22 AAA domain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.6 0.4 0.00011 0.12 6 39 .. 3 43 .. 2 232 .. 0.85 Alignments for each domain: == domain 1 score: 12.6 bits; conditional E-value: 0.00011 AAA_22 6 gilvvtGesGtGKTtllrrlleqldeeakaee.......er 39 + +v+ G++G+GKT l+++l++e+ + + 23726_FusoPortal_Gene_641 3 KAIVIAGPTGVGKTKISIDLAKKLNAEIISSDsaqvyrgLN 43 579*************9999999977665555666655544 PP >> T2SSE Type II/IV secretion system protein # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.2 0.2 0.001 1.1 130 155 .. 3 28 .. 1 39 [. 0.81 2 ? 3.5 0.0 0.028 29 112 139 .. 74 99 .. 49 119 .. 0.91 Alignments for each domain: == domain 1 score: 8.2 bits; conditional E-value: 0.001 T2SSE 130 glilvsGgTgsGKttllyallkeink 155 + i+++G+Tg GKt + l k++n+ 23726_FusoPortal_Gene_641 3 KAIVIAGPTGVGKTKISIDLAKKLNA 28 679***********887777766665 PP == domain 2 score: 3.5 bits; conditional E-value: 0.028 T2SSE 112 ealkekiaevlrkavrerglilvsGgTg 139 ++++++++++l++ +++++l+ GgTg 23726_FusoPortal_Gene_641 74 GNFEKDVNKILNQN--SEKNFLLVGGTG 99 578899*******9..9999*******9 PP >> RsgA_GTPase RsgA GTPase # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.5 0.2 0.00076 0.8 99 127 .. 2 30 .. 1 59 [. 0.70 2 ? 3.6 0.1 0.048 50 61 130 .. 51 122 .. 42 128 .. 0.80 Alignments for each domain: == domain 1 score: 9.5 bits; conditional E-value: 0.00076 TSEEEEECSTTSSHHHHHHHHCTT----- CS RsgA_GTPase 99 dktsvlvGqSGvGKStLinallpelelkt 127 +k +v++G++GvGK+ + l+ +l++++ 23726_FusoPortal_Gene_641 2 NKAIVIAGPTGVGKTKISIDLAKKLNAEI 30 5789***********99988888844443 PP == domain 2 score: 3.6 bits; conditional E-value: 0.048 HHHHHHHHHHHHHHTTSEEEE--TTT.HTTHHHHHHHCTTSEEEEECSTTSSHHHHHHHH..CTT-----S-- CS RsgA_GTPase 61 eeeeleelkeelealgyevllvsakt.kegleelkellkdktsvlvGqSGvGKStLinal..lpelelktgev 130 eee e +k++l ++ +vl+ s+ + +++++++ ++ ++k +lvG +G ++ n l lpe++ kt+e 23726_FusoPortal_Gene_641 51 EEE-KEGIKHHLIDIVEPVLKYSVGNfEKDVNKILNQNSEKNFLLVGGTGLYLNSVTNGLsiLPEADKKTREY 122 444.6888889999999999999986258999******************99999999652267888888775 PP >> IstB_IS21 IstB-like ATP binding protein # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.8 0.0 6.6e-05 0.069 48 71 .. 3 26 .. 1 62 [. 0.86 2 ? -3.2 0.0 5.5 5.7e+03 46 57 .. 88 99 .. 86 101 .. 0.85 Alignments for each domain: == domain 1 score: 12.8 bits; conditional E-value: 6.6e-05 IstB_IS21 48 enivllGpsGvGKshlaialgvea 71 ++iv+ Gp+GvGK+ ++i l+++ 23726_FusoPortal_Gene_641 3 KAIVIAGPTGVGKTKISIDLAKKL 26 689*************99999875 PP == domain 2 score: -3.2 bits; conditional E-value: 5.5 IstB_IS21 46 kkenivllGpsG 57 +++n++l+G++G 23726_FusoPortal_Gene_641 88 SEKNFLLVGGTG 99 5789******99 PP >> Hydin_ADK Hydin Adenylate kinase-like domain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.7 0.3 5e-05 0.052 1 32 [. 4 35 .. 4 38 .. 0.95 Alignments for each domain: == domain 1 score: 13.7 bits; conditional E-value: 5e-05 Hydin_ADK 1 aiivhGaPlsGKtatavtlakkYeaAlLtiDs 32 ai++ G+ GKt+ ++ lakk +a +++ Ds 23726_FusoPortal_Gene_641 4 AIVIAGPTGVGKTKISIDLAKKLNAEIISSDS 35 89**************************9997 PP >> CbiA CobQ/CobB/MinD/ParA nucleotide binding domain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.6 2.2 0.0002 0.21 2 71 .. 5 166 .. 4 249 .. 0.66 Alignments for each domain: == domain 1 score: 11.6 bits; conditional E-value: 0.0002 EEEESSTTSSHHHHHHHHHHHHHHTT--EEEEE.EEESSCCCCHHTTEB-HHHH.............................. CS xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxx.............................. RF CbiA 2 aiastkGGvGKTtlaanLaralarrglrVllvD.aDpqannlaileglendiep.............................. 54 +++++ GvGKT +++ La+ l+ +++ D a++ l+ + + ++++e+ 23726_FusoPortal_Gene_641 5 IVIAGPTGVGKTKISIDLAKKLNA---EIISSDsAQVY-RGLN-IGTAKIREEEkegikhhlidivepvlkysvgnfekdvnki 83 5778889*************9998...88888855554.3334.3333333333457777777777788888777777777777 PP ..................................................................CCHCCCHHHHHHCHCHH CS ..................................................................xxxxxxxxxxxxxxxxx RF CbiA 55 ..................................................................dlkrllellealgkkka 71 ++ rl++++e++ + + 23726_FusoPortal_Gene_641 84 lnqnseknfllvggtglylnsvtnglsilpeadkktreylttlnnqallelalkydeeatkeihpnNRVRLERVVEVFLLTGQ 166 77777777777777777777777777777777777777777777777777777777777777777766666666666665533 PP >> AAA_14 AAA domain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.2 0.1 0.00012 0.13 2 88 .. 2 85 .. 1 107 [. 0.59 2 ? -0.2 0.6 0.83 8.6e+02 31 59 .. 181 202 .. 162 287 .. 0.64 Alignments for each domain: == domain 1 score: 12.2 bits; conditional E-value: 0.00012 AAA_14 2 rkilvitGaRrvGKTtllkqlikellvkkesilyinldderdkkladpekllelileklkeekktylflDEiqev.....peweka 82 +k++vi G+ vGKT + +l+k+l +i+ d+ + ++ + i+e+ ke + + ++D + v ++ek 23726_FusoPortal_Gene_641 2 NKAIVIAGPTGVGKTKISIDLAKKLN---AEIISS--DSAQVYRGLNI--GTAKIREEEKE-GIKHHLIDIVEPVlkysvGNFEKD 79 799*******************9988...444433..33333322222..12344444333.444555555554444444555555 PP AAA_14 83 lkslvd 88 ++++++ 23726_FusoPortal_Gene_641 80 VNKILN 85 555555 PP == domain 2 score: -0.2 bits; conditional E-value: 0.83 AAA_14 31 esilyinldderdkkladpekllelilek 59 ++l i+l+++r+ + + i ++ 23726_FusoPortal_Gene_641 181 FKFLKIALERNRENLY-------DRINKR 202 3444444444443222.......222222 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (301 residues searched) Target model(s): 16712 (2907032 nodes) Passed MSV filter: 884 (0.0528961); expected 334.2 (0.02) Passed bias filter: 439 (0.0262685); expected 334.2 (0.02) Passed Vit filter: 73 (0.00436812); expected 16.7 (0.001) Passed Fwd filter: 16 (0.000957396); expected 0.2 (1e-05) Initial search space (Z): 16712 [actual number of targets] Domain search space (domZ): 16 [number of targets reported over threshold] # CPU time: 0.29u 0.23s 00:00:00.52 Elapsed: 00:00:00.30 # Mc/sec: 2916.72 // [ok]