# hmmscan :: search sequence(s) against a profile database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query sequence file: AA/23726_FusoPortal_Gene_836.faa # target HMM database: Pfam-A.hmm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: 23726_FusoPortal_Gene_836 [L=251] Description: # 931835 # 932587 # -1 # ID=1_836;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.271 Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 7.2e-41 139.7 0.3 9.1e-41 139.4 0.3 1.1 1 adh_short short chain dehydrogenase 1.1e-27 97.1 0.1 1.4e-27 96.7 0.1 1.1 1 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 4e-12 46.3 0.0 6.1e-12 45.7 0.0 1.2 1 KR KR domain 9.2e-07 28.5 1.0 6.6e-06 25.7 1.0 1.9 1 Epimerase NAD dependent epimerase/dehydratase family 3.1e-06 27.4 0.1 5.4e-06 26.6 0.1 1.4 1 Sacchrp_dh_NADP Saccharopine dehydrogenase NADP binding doma 0.00028 20.3 0.9 0.00082 18.7 0.8 1.8 1 GDP_Man_Dehyd GDP-mannose 4,6 dehydratase 0.00052 19.9 0.0 0.00069 19.5 0.0 1.3 1 NAD_binding_10 NAD(P)H-binding 0.00074 18.5 0.4 0.0011 17.9 0.1 1.5 2 3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomeras 0.0052 16.9 0.4 0.02 15.1 0.0 2.1 2 TrkA_N TrkA-N domain 0.0054 15.9 0.0 0.0086 15.3 0.0 1.3 1 AlaDh_PNT_C Alanine dehydrogenase/PNT, C-terminal domain 0.0079 15.2 0.0 0.011 14.7 0.0 1.2 1 RmlD_sub_bind RmlD substrate binding domain ------ inclusion threshold ------ 0.023 14.2 0.1 0.049 13.1 0.1 1.6 1 UDPG_MGDP_dh_N UDP-glucose/GDP-mannose dehydrogenase family 0.055 13.2 0.7 0.1 12.4 0.7 1.4 1 Gemini_AL3 Geminivirus AL3 protein Domain annotation for each model (and alignments): >> adh_short short chain dehydrogenase # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 139.4 0.3 7.1e-44 9.1e-41 3 193 .. 3 187 .. 1 189 [. 0.95 Alignments for each domain: == domain 1 score: 139.4 bits; conditional E-value: 7.1e-44 EEEETTTSHHHHHHHHHHHHTT-EEEEEESCHHHHHHHHHHHHHTTSEEEEEE-TTTSHHHHHHHHHHHHHHHSSESEEEE--- CS adh_short 3 vlvtGassGIGraiakelakeGakvvvvdrseekleevakelkeegakalaiqvDvtdreevealvekavkklgkldvLvnNAG 86 ++++G+ssGIG+ +ak++a+ G +v++++ +eekl k+++e+++++ +++vDv+++ee++ ++++ g+ld+++n AG 23726_FusoPortal_Gene_836 3 IFIVGGSSGIGLSLAKRYASLGNEVAICGTNEEKL----KKIEECNKNIKIYKVDVRNKEELKSAIDDFS--KGNLDLIINSAG 80 89*********************************....444444456********************95..59********** PP SS--SSGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHCTCEEEEEEEEGGGTSB-TTBHHHHHHHHHHHHHHHHHHHHHGGC CS adh_short 87 itgsgpfselseeewervievNltgvflltravlpamlkqssGrIvnvsSvagkvpvagvaaYsAsKaavagltrslakelapt 170 i ++ + +l+++e ++i++Nltgv+++ +av + m k+++G+I +sS ag+ ++ ++Y+ +K + g ++ + ++++ 23726_FusoPortal_Gene_836 81 IYTNNRTTKLTDKEAYAMIDINLTGVLNTFEAVRDVMFKNNRGHIAIISSAAGLLDYPKASVYARTKMTIMGVCETYRSFFRNY 164 ************************************************************************************ PP TEEEEEEEE-SBSSHHHHHHCCH CS adh_short 171 girvnavaPGlvdTdmakelrek 193 +i++++++PG+++Td k+l+e+ 23726_FusoPortal_Gene_836 165 NINITTIVPGYIATDKLKSLSEE 187 ***************99998875 PP >> adh_short_C2 Enoyl-(Acyl carrier protein) reductase # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 96.7 0.1 1.1e-30 1.4e-27 3 186 .. 9 188 .. 7 205 .. 0.93 Alignments for each domain: == domain 1 score: 96.7 bits; conditional E-value: 1.1e-30 TTSHHHHHHHHHHHTT-EEEEEESSGGHHHHHHHHHHHTTSEEEE--TTSHHHHHHHHHHHHHHHSSEEEEEE-----EGCSS- CS adh_short_C2 3 asgIGraiAkalaeeGaevvltdlneeakkrveelaeelgaevlecDVtdeeqvealveevvekfgklDilvnnagiapklkgp 86 sgIG +Ak++a+ G ev+++ nee+ k++ee + + +++++DV+++e++++++++ + g+lD ++n+agi ++ ++ 23726_FusoPortal_Gene_836 9 SSGIGLSLAKRYASLGNEVAICGTNEEKLKKIEECNK--NIKIYKVDVRNKEELKSAIDDFSK--GNLDLIINSAGIYTN--NR 86 59**************************888888887..4669*****************987..89*************..** PP GGGH-HHHHHHHHHHHTHHHHHHHHHHHH.HCTSC.CEEEEEEEGGGTSBSTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEE CS adh_short_C2 87 fletsreefdkaldvnlyslfllakaalp.lmkeg.gsivnlssvgaervvpnynaygaaKaalealtrylAvelgpkgiRvNa 168 +++++++e ++d+nl++++++ +a++ ++k++ g i +ss ++ p+ ++y+ +K + +++ + + +++i + + 23726_FusoPortal_Gene_836 87 TTKLTDKEAYAMIDINLTGVLNTFEAVRDvMFKNNrGHIAIISSAAGLLDYPKASVYARTKMTIMGVCETYRSFFRNYNINITT 170 *****************************6556558************************************************ PP EEE--BHCTGGGGSTTHH CS adh_short_C2 169 vspgpikTlaasgikgfe 186 + pg+i+T+ +++++++ 23726_FusoPortal_Gene_836 171 IVPGYIATDKLKSLSEED 188 **********99998544 PP >> KR KR domain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 45.7 0.0 4.7e-15 6.1e-12 4 155 .. 4 149 .. 2 164 .. 0.91 Alignments for each domain: == domain 1 score: 45.7 bits; conditional E-value: 4.7e-15 EEETTTSHHHHHHHHHHHHHHS-EEEEE-SS..--HHHHHHHHHHHHTT-EEEE----TT-HHHHHHHHHHHHHHSS---EEEE CS KR 4 litGGlGgLGlelarwlaekgarhlvllsRsaaadedskaliaelealgaevevvaaDvsdkdavealleeikaeeppikGvih 87 +i+GG g+Gl+la+ a+ g+ ++++++ + +++++++e+ + +++++++Dv +k+++++++++++ ++++ +i+ 23726_FusoPortal_Gene_836 4 FIVGGSSGIGLSLAKRYASLGN-EVAICGTN-------EEKLKKIEECNKNIKIYKVDVRNKEELKSAIDDFS--KGNLDLIIN 77 69***************99996.58899988.......568999999999**********************8..668****** PP ---------TTT--HHHHHHHHTTTTHHHHHHHHHTTT....S--SEEEEEEEHHHHH--TT-HHHHHHHHH CS KR 88 aAgvlrdklleemtaedleqvlapKvkGawnLhelled....esldffvlfSSiagllgsagqanYaaaNaf 155 +Ag+ ++ +++t+++ +++ ++G+ n e+++d ++ ++ ++SS+agll ++ + Ya + 23726_FusoPortal_Gene_836 78 SAGIYTNNRTTKLTDKEAYAMIDINLTGVLNTFEAVRDvmfkNNRGHIAIISSAAGLLDYPKASVYARTKMT 149 ************************************9999988999********************987655 PP >> Epimerase NAD dependent epimerase/dehydratase family # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.7 1.0 5.1e-09 6.6e-06 1 165 [. 3 169 .. 3 180 .. 0.68 Alignments for each domain: == domain 1 score: 25.7 bits; conditional E-value: 5.1e-09 EEEETTTSHHHHHHHHHHHHCTSEEEEEES-STTTTCHHCHHC....EEEE--TT-HHHHHHHHHHH...T-SEEEE--S.--- CS Epimerase 1 ilVtGatGfiGsalvkallekgyevigldrlssasntarledl....elveldltdrsalerlfkee...qpdavihlAa.vgg 76 i+++G++ iG l+k+ ++ g ev ++ ++ +++e+ +++++d++++++l+ +++++ + d +i+ A+ + + 23726_FusoPortal_Gene_836 3 IFIVGGSSGIGLSLAKRYASLGNEVAICGTNE--EKLKKIEECnkniKIYKVDVRNKEELKSAIDDFskgNLDLIINSAGiYTN 84 799*******************8854444442..2222333323456***********99999998765689********6544 PP HHHH.H..HSHHHHHHHHTHHHHHHHHHHH....HHTCTEEEEEEEGGGGTSBSSSSBSTCSTTS----SSHHHHHHHHHHHHH CS Epimerase 77 vaas.s..edpadfieknlqgtlnlleaar....kagvkrllflsSsevYGkdaeqpkeettltgplkpnspYaaaKlageklv 153 +++ +++ ++i++nl g+ln +ea+r k++ + +sS G + ++ s Ya++K+++ ++ 23726_FusoPortal_Gene_836 85 NRTTkLtdKEAYAMIDINLTGVLNTFEAVRdvmfKNNRGHIAIISS--AAG---------LL---DYPKASVYARTKMTIMGVC 154 43331311445567789**********9994444445547777777..223.........23...5567788888888888888 PP HHHH...HHHT-EEE CS Epimerase 154 eaya...aqyglnai 165 e y+ + y++n++ 23726_FusoPortal_Gene_836 155 ETYRsffRNYNINIT 169 877622234455555 PP >> Sacchrp_dh_NADP Saccharopine dehydrogenase NADP binding domain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.6 0.1 4.2e-09 5.4e-06 1 108 [. 3 110 .. 3 130 .. 0.85 Alignments for each domain: == domain 1 score: 26.6 bits; conditional E-value: 4.2e-09 EEEE--.SHHHHHHHHHHHCTCCT-GEEEEEESSHHHHHHHHCHHTTTCEEEEE--TTTHHHHHHHHHTTS.....SEEEE-SS CS Sacchrp_dh_NADP 1 vliiGa.GsvGqavaellarhfdvdaeitvadrskeklealaakalgvrfeaialdaenyeavLaallkeg.....dlvvnlsp 78 + i+G+ ++G ++a+ +a ++ e+++++ ++ekl+++ + + +++++++d+ n+e+ L++++ + dl++n ++ 23726_FusoPortal_Gene_836 3 IFIVGGsSGIGLSLAKRYASLGN---EVAICGTNEEKLKKIEE--CNKNIKIYKVDVRNKEE-LKSAIDDFskgnlDLIINSAG 80 56777778999999999999987...6**************87..799**************.****9999999********** PP GGGHHHHHHHHHHHT-EEEESS-BCGCCSC CS Sacchrp_dh_NADP 79 pissldvlkaCietgvhyvdtsiskeertn 108 + ++ k+ + +++d+ + +t 23726_FusoPortal_Gene_836 81 IYTNNRTTKLTDKEAYAMIDINLTGVLNTF 110 *********999999999996663334444 PP >> GDP_Man_Dehyd GDP-mannose 4,6 dehydratase # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.7 0.8 6.4e-07 0.00082 2 130 .. 5 131 .. 4 174 .. 0.76 Alignments for each domain: == domain 1 score: 18.7 bits; conditional E-value: 6.4e-07 EETTTSHHHHHHHHHHHHCT-CCEEEEEEESS-TTHHHHHCTTT...TTGCCEEEEE--TT-HHHHHHHHHHH...T-SEEEE- CS GDP_Man_Dehyd 2 iTGiaGfiGsylaelLlekgyevhgivrrsssfntgriehlykdpeaeleenlklvkgDltDssslerllaev...qpdevynL 82 i G++ iG la++ + g ev + +++ ++++ie++ ++n+k++k+D++++++l++++++ + d ++n 23726_FusoPortal_Gene_836 5 IVGGSSGIGLSLAKRYASLGNEVAIC--GTNEEKLKKIEEC--------NKNIKIYKVDVRNKEELKSAIDDFskgNLDLIINS 78 56666667888888888888887543..3333344555554........5689****************98776669******* PP -S---HHHHT....TSHHCHHHHHTHHHHHHHHHHHHCT...TTSEEEEEEEG CS GDP_Man_Dehyd 83 AAqshVdvsf....ekPeytaevnvlGtlrLLeairalgle.kkvrfyqaSts 130 A+ + ++ +++ +++++n +G+l+ +ea+r++ + ++ ++ ++S++ 23726_FusoPortal_Gene_836 79 AGIYTNNRTTkltdKEAYAMIDINLTGVLNTFEAVRDVMFKnNRGHIAIISSA 131 **97766655222256777899***************9765145666666765 PP >> NAD_binding_10 NAD(P)H-binding # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.5 0.0 5.3e-07 0.00069 1 103 [. 7 136 .. 7 211 .. 0.70 Alignments for each domain: == domain 1 score: 19.5 bits; conditional E-value: 5.3e-07 TTTSHHHHHHHHHHHHC.T-EEEEEETTHHHCHHHH.CTTTCEEEE--TT.CCHHHHHHT.....T-SEEEES---TCC..... CS NAD_binding_10 1 GAtGkvGrllvkellargghevtalvRnpeklaele.aeeglevvegdvtdvedlaealk.....gadaVvsalggggk..... 73 G++ ++G l+k+ ++ g ev + n+ekl+++e ++++++ ++dv ++e+l++a++ + d ++ ++g + 23726_FusoPortal_Gene_836 7 GGSSGIGLSLAKRYASLG-NEVAICGTNEEKLKKIEeCNKNIKIYKVDVRNKEELKSAIDdfskgNLDLIINSAGIYTNnrttk 89 89999************6.8***************94459*******************9555555588888886555533334 PP ..HHHH..............HHHHHHHHHHCT--EEEEEEE.TTTTS CS NAD_binding_10 74 ..deeg..............aknivdaakaagvkRfvlvss.igvgd 103 d+e+ +++ d++ +++ ++ ++ss +g d 23726_FusoPortal_Gene_836 90 ltDKEAyamidinltgvlntFEAVRDVMFKNNRGHIAIISSaAGLLD 136 44333377777777776665666666777777777766665245554 PP >> 3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.9 0.1 8.4e-07 0.0011 2 105 .. 5 113 .. 4 147 .. 0.74 2 ? -3.1 0.0 2.2 2.8e+03 20 47 .. 178 205 .. 170 212 .. 0.56 Alignments for each domain: == domain 1 score: 17.9 bits; conditional E-value: 8.4e-07 3Beta_HSD 2 vtGggGFlGrrivkeLlrleelkevrvlDlresselleelskvnvktkkvlegDvrdkekleealegv.....dvvihtasivd 80 ++Gg+ +G ++ k+ +l++ ev ++ +e e+l++++++n + +k+ ++Dvr+ke+l+ a+++ d++i a+i 23726_FusoPortal_Gene_836 5 IVGGSSGIGLSLAKRYASLGN--EVAICGTNE--EKLKKIEECNKN-IKIYKVDVRNKEELKSAIDDFskgnlDLIINSAGIYT 83 789998999999999999996..888876655..556699999988.79****************9852222267888877754 PP 3Beta_HSD 81 vag..kleede...ilevnvkGTqnvleac 105 kl+++e + ++n++G n ea 23726_FusoPortal_Gene_836 84 NNRttKLTDKEayaMIDINLTGVLNTFEAV 113 332122222221114567777777777765 PP == domain 2 score: -3.1 bits; conditional E-value: 2.2 3Beta_HSD 20 leelkevrvlDlresselleelskvnvk 47 +++lk + D+ +++++l+e +++n++ 23726_FusoPortal_Gene_836 178 TDKLKSLSEEDITKKPTVLSEEESTNII 205 5555555555566666655555555544 PP >> TrkA_N TrkA-N domain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.1 0.0 1.5e-05 0.02 1 58 [. 4 63 .. 4 95 .. 0.92 2 ? -1.1 0.0 1.6 2.1e+03 89 111 .. 201 223 .. 193 230 .. 0.61 Alignments for each domain: == domain 1 score: 15.1 bits; conditional E-value: 1.5e-05 EEEES-SHHHHHHHHHHHH.TTEEEEEEESSHHHHHHHHHTT..SEEEES-TTSHHHHHHT CS TrkA_N 1 iiiiGlGrvGrslaeeLse.ggkdvvvidkdeerveelreeg..levvvgdatdeevLeea 58 +i+ G + +G sla++ + g+ +v + ++ee++++++e + +++++ d+ ++e L++a 23726_FusoPortal_Gene_836 4 FIVGGSSGIGLSLAKRYASlGN-EVAICGTNEEKLKKIEECNknIKIYKVDVRNKEELKSA 63 6899999************778.6**************98776699************987 PP == domain 2 score: -1.1 bits; conditional E-value: 1.6 SSEEEEEESSGGGHHHHHHHTTS CS TrkA_N 89 kkkiiaraqdpehaellkklgad 111 +ii +a +++++++++ l 23726_FusoPortal_Gene_836 201 STNIIIKAIEEKKEKIIYPLSMK 223 34566777777766666665554 PP >> AlaDh_PNT_C Alanine dehydrogenase/PNT, C-terminal domain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.3 0.0 6.7e-06 0.0086 30 104 .. 2 84 .. 1 100 [. 0.73 Alignments for each domain: == domain 1 score: 15.3 bits; conditional E-value: 6.7e-06 EEEEESTSH.HHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTCECEE...HCHHHHHHHHHHHH.....-SEEEE---BTTS CS AlaDh_PNT_C 30 kvlviGgGv.aGlqAiatakglgakVtvlDvrparleqleslgakfvev...lksqeellaeavke.....advvigtvlipGk 104 k++++Gg Gl+ ++ ++lg +V ++ +++++l+++e+++++ +++ +++e+l++a+ + d++i ++ i + 23726_FusoPortal_Gene_836 2 KIFIVGGSSgIGLSLAKRYASLGNEVAICGTNEEKLKKIEECNKN-IKIykvDVRNKEELKSAIDDfskgnLDLIINSAGIYTN 84 678888743269999**************************8887.66644477888888888865222226899988888654 PP >> RmlD_sub_bind RmlD substrate binding domain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.7 0.0 8.7e-06 0.011 1 82 [. 1 106 [. 1 117 [. 0.78 Alignments for each domain: == domain 1 score: 14.7 bits; conditional E-value: 8.7e-06 EEEEEESTTSHHHHHHHHHCTTTSEEEEEE-TT.................T--TTSHHHHHHHHHHH--...SEEEE--.---- CS RmlD_sub_bind 1 mkilvtGanGqlGseLakqlaeeglevlaltre.................eldltdaeavaellkeakp...dvvvnaA.Ayta 63 mki ++G++ +G Lak+ a+ g ev ++ + ++d++++e+++++++++++ d+++n A yt+ 23726_FusoPortal_Gene_836 1 MKIFIVGGSSGIGLSLAKRYASLGNEVAICGTNeeklkkieecnknikiyKVDVRNKEELKSAIDDFSKgnlDLIINSAgIYTN 84 89********************9988888866668*****************************88764323799997737998 PP HHHHHHSHHHHHH...HHTHHH CS RmlD_sub_bind 64 vDkaEseeeaaya...vnaeav 82 ++aya +n ++v 23726_FusoPortal_Gene_836 85 NRTTKLTDKEAYAmidINLTGV 106 7666555444443222666666 PP >> UDPG_MGDP_dh_N UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.1 0.1 3.8e-05 0.049 1 50 [. 1 53 [. 1 74 [. 0.81 Alignments for each domain: == domain 1 score: 13.1 bits; conditional E-value: 3.8e-05 SEEEEE-.-STTHHHHHHHHHHCTSEEEEE-S-HHHHHHHCT..TS-SS--TT CS UDPG_MGDP_dh_N 1 mkisviG.lGYvGlvtaavlaeighevigvDideekvdklns..gkipiyepg 50 mki ++G + +Gl a +a++g+ev ++ +eek +k+++ ++i+iy + 23726_FusoPortal_Gene_836 1 MKIFIVGgSSGIGLSLAKRYASLGNEVAICGTNEEKLKKIEEcnKNIKIYKVD 53 78888863567****************************98622567777665 PP >> Gemini_AL3 Geminivirus AL3 protein # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.4 0.7 7.9e-05 0.1 29 116 .. 36 125 .. 33 128 .. 0.85 Alignments for each domain: == domain 1 score: 12.4 bits; conditional E-value: 7.9e-05 Gemini_AL3 29 kllrvedlatrtkiyqiqirfnhnlrkald.lhkcflnlvvlsssrrlsG.ealldrlklrvllyldnlGvisinnviravnhv 110 kl ++e+ + kiy++ +r +l+ a+d + k l+l + s+ + ++ l ++ ++ Gv+ + +r v + 23726_FusoPortal_Gene_836 36 KLKKIEECNKNIKIYKVDVRNKEELKSAIDdFSKGNLDLIINSAGIYTNNrTTKLTDKEAYAMIDINLTGVLNTFEAVRDVMFK 119 789999999999***************995489********9999876541566777788899999999999999999999998 PP Gemini_AL3 111 lykefv 116 ++ ++ 23726_FusoPortal_Gene_836 120 NNRGHI 125 777665 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (251 residues searched) Target model(s): 16712 (2907032 nodes) Passed MSV filter: 1038 (0.0621111); expected 334.2 (0.02) Passed bias filter: 544 (0.0325515); expected 334.2 (0.02) Passed Vit filter: 54 (0.00323121); expected 16.7 (0.001) Passed Fwd filter: 13 (0.000777884); expected 0.2 (1e-05) Initial search space (Z): 16712 [actual number of targets] Domain search space (domZ): 13 [number of targets reported over threshold] # CPU time: 0.27u 0.23s 00:00:00.50 Elapsed: 00:00:00.31 # Mc/sec: 2353.76 // [ok]