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Entry type
Status
Per-residue features
Colour by
1_1_36S_FusoPortal_Gene_1516
Length
285 amino acids
Protein family membership
- tRNA pseudouridine synthase II, TruB (IPR014780)
Homologous superfamilies
-
Homologous superfamily
1
50
100
150
200
250
285
Domains and repeats
-
Domain23 - 171
- Pseudouridine synthase II, N-terminal (IPR002501)
172 - 215- tRNA pseudouridylate synthase B, C-terminal (IPR032819)
232 - 279
1
50
100
150
200
250
285
Detailed signature matches
-
-
231 - 285
-

Unintegrated signatures
-
1 - 218
-
cd02573 (PseudoU_sy...)3 - 210
Residue annotation
-
RNA binding site c...14SRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)16FRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)19IRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)31IRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)32GRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)33HRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)35GRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)36TRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)37LRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)38DRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)39PRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)53TRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)56ARNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)57QRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)60ERNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)64KRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)66YRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)117YRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)118SRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)119ARNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)120IRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)121KRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)142RRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)167KRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)168GRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)169TRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)170YRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)171IRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)172RRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB)193RRNA binding site
14S, 16F, 19I, 31I, 32G, 33H, 35G, 36T, 37L, 38D, 39P, 53T, 56A, 57Q, 60E, 64K, 66Y, 117Y, 118S, 119A, 120I, 121K, 142R, 167K, 168G, 169T, 170Y, 171I, 172R, 193R
CDD
cd02573 (PseudoU_synth_EcTruB) -
active site cd0257335G36T37L38D172R
GO term prediction
Biological Process
GO:0001522 pseudouridine synthesis
GO:0006396 RNA processing
GO:0009451 RNA modification
Molecular Function
GO:0003723 RNA binding
GO:0009982 pseudouridine synthase activity
Cellular Component
None predicted.