23726_FusoPortal_Gene_1929

Protein

23726_FusoPortal_Gene_1929

Length

181 amino acids

Protein family membership

Ribosome hibernation promoting factor/RaiA (IPR003489)
- Ribosome hibernation promoting factor, long/plastid (IPR034694)

Homologous superfamilies

Homologous superfamily
1 - 103
Ribosome hibernation promotion factor-like (IPR036567)

1 20 40 60 80 100 120 140 160 181

Domains and repeats

Domain
127 - 178
Sigma 54 modulation/S30EA ribosomal protein, C-terminal (IPR032528)

1 20 40 60 80 100 120 140 160 181

Detailed signature matches

IPR036567

Ribosome hibernation promotion factor-like
1. G3DSA:3.30.16...
  
  1 - 103
  
  GENE3D
  G3DSA:3.30.160.100 (G3DSA:3.30.160.100)
2. SSF69754 (Ribosome ...)
  
  2 - 102
  
  SUPERFAMILY
  SSF69754 (Ribosome binding protein Y (YfiA homologue))
IPR003489

Ribosome hibernation promoting factor/RaiA
1. PF02482 (Ribosomal_...)
  
  4 - 96
  
  Pfam
  PF02482 (Ribosomal_S30AE)
2. TIGR00741
  
  1 - 98
  
  TIGRFAMs
  TIGR00741 (TIGR00741)
3. cd00552 (RaiA)
  
  2 - 95
  
  CDD
  cd00552 (RaiA)
IPR034694

Ribosome hibernation promoting factor, long/plastid
1. MF_00839 (HPF)
  
  1 - 181
  
  HAMAP
  MF_00839 (HPF)
IPR032528

Sigma 54 modulation/S30EA ribosomal protein, C-terminal
1. PF16321 (Ribosom_S3...)
  
  127 - 178
  
  Pfam
  PF16321 (Ribosom_S30AE_C)

no IPR

Unintegrated signatures

PTHR33231 (FAMILY N...)

1 - 180

PANTHER
PTHR33231 (FAMILY NOT NAMED)
PTHR33231:SF1 (30S ...)

1 - 180

PANTHER
PTHR33231:SF1 (30S RIBOSOMAL PROTEIN-RELATED)

Residue annotation

30S subunit bindin...

4S

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

6H

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

8R

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

26K

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

29K

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

35I

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

36K

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

40T

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

44S

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

57L

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

60L

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

61S

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

62G

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

63S

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

66K

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

68T

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

71E

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

73D

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

76A

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

90K

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

91K

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

95K

30S subunit binding site
4S, 6H, 8R, 26K, 29K, 35I, 36K, 40T, 44S, 57L, 60L, 61S, 62G, 63S, 66K, 68T, 71E, 73D, 76A, 90K, 91K, 95K
CDD
cd00552 (RaiA)

GO term prediction

Biological Process

GO:0044238 primary metabolic process

Molecular Function

None predicted.

Cellular Component

None predicted.

Filter view on

Entry type

Status

Per-residue features

23726_FusoPortal_Gene_1929

Protein family membership

Homologous superfamilies

Domains and repeats

Detailed signature matches

Residue annotation

GO term prediction

Biological Process

Molecular Function

Cellular Component