Protein

25563_FusoPortal_Gene_456

Length
436 amino acids

Protein family membership

Homologous superfamilies

  1. Homologous superfamily
  2. Homologous superfamily
1 50 100 150 200 250 300 350 400 436

Domains and repeats

  1. Domain
  2. Domain
1 50 100 150 200 250 300 350 400 436

Detailed signature matches

  1. Homologous superfamily IPR013325
    RNA polymerase sigma factor, region 2
    1. SSF88946 (Sigma2 do...)
  2. Homologous superfamily IPR036388
    Winged helix-like DNA-binding domain superfamily
    1. G3DSA:1.10.10.10
  3. Homologous superfamily IPR013324
    RNA polymerase sigma factor, region 3/4
    1. SSF88659 (Sigma3 an...)
  4. Family IPR028630
    RNA polymerase sigma factor RpoD
    1. MF_00963 (Sigma70_R...)
  5. Domain IPR007127
    RNA polymerase sigma factor 70, region 1.1
    1. PF03979 (Sigma70_r1_1)
  6. Domain IPR009042
    RNA polymerase sigma-70 region 1.2
    1. PF00140 (Sigma70_r1_2)
  7. Domain IPR014284
    RNA polymerase sigma-70 like domain
    1. TIGR02937
  8. Domain IPR007627
    RNA polymerase sigma-70 region 2
    1. PF04542 (Sigma70_r2)
  9. Domain IPR000943
    RNA polymerase sigma-70
    1. PS00716 (SIGMA70_2)
    2. PR00046 (SIGMA70FCT)
    3. PS00715 (SIGMA70_1)
  10. Domain IPR012760
    RNA polymerase sigma factor RpoD, C-terminal
    1. TIGR02393
  11. Domain IPR007624
    RNA polymerase sigma-70 region 3
    1. PF04539 (Sigma70_r3)
  12. Domain IPR007630
    RNA polymerase sigma-70 region 4
    1. PF04545 (Sigma70_r4)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:1.10.60...
  3. PTHR30603 (RNA POLY...)
  4. PTHR30603:SF0 (RNA ...)
  5. cd06171 (Sigma70_r4)
  6. mobidb-lite (disord...)

Residue annotation

  1. DNA binding residu...

GO term prediction

Biological Process

GO:0006352 DNA-templated transcription, initiation
GO:0006355 regulation of transcription, DNA-templated

Molecular Function

GO:0003677 DNA binding
GO:0003700 DNA binding transcription factor activity
GO:0016987 sigma factor activity

Cellular Component

None predicted.

Generated with InterProScan 5.27-66.0