25586_FusoPortal_Gene_1561

Protein

25586_FusoPortal_Gene_1561

Length

102 amino acids

Protein family membership

Histone-like DNA-binding protein (IPR000119)

Homologous superfamilies

Homologous superfamily
1 - 99
Integration host factor (IHF)-like DNA-binding domain superfamily (IPR010992)

1 10 20 30 40 50 60 70 80 90 102

Domains and repeats

None predicted.

Detailed signature matches

IPR010992

Integration host factor (IHF)-like DNA-binding domain superfamily
1. SSF47729 (IHF-like ...)
  
  1 - 93
  
  SUPERFAMILY
  SSF47729 (IHF-like DNA-binding proteins)
2. G3DSA:4.10.52...
  
  1 - 99
  
  GENE3D
  G3DSA:4.10.520.10 (G3DSA:4.10.520.10)
IPR000119

Histone-like DNA-binding protein
1. PF00216 (Bac_DNA_bi...)
  
  1 - 89
  
  Pfam
  PF00216 (Bac_DNA_binding)
2. PR01727 (DNABINDINGHU)
  
  58 - 71
  
  PRINTS
  PR01727 (DNABINDINGHU)
  
  40 - 55
  
  PRINTS
  PR01727 (DNABINDINGHU)
  
  74 - 88
  
  PRINTS
  PR01727 (DNABINDINGHU)
3. PTHR33175 (FAMILY N...)
  
  1 - 102
  
  PANTHER
  PTHR33175 (FAMILY NOT NAMED)

no IPR

Unintegrated signatures

PTHR33175:SF6 (DNA-...)

1 - 102

PANTHER
PTHR33175:SF6 (DNA-BINDING PROTEIN HU-BETA)
cd13831 (HU)

2 - 78

CDD
cd13831 (HU)

Residue annotation

dimer interface cd...

6F

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

9A

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

10F

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

13K

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

22E

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

23R

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

24L

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

25V

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

27A

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

28F

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

29L

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

31T

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

32V

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

33E

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

35A

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

36L

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

40D

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

41G

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

42V

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

43R

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

44F

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

47F

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

75K

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

76V

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)

77V

dimer interface
6F, 9A, 10F, 13K, 22E, 23R, 24L, 25V, 27A, 28F, 29L, 31T, 32V, 33E, 35A, 36L, 40D, 41G, 42V, 43R, 44F, 47F, 75K, 76V, 77V
CDD
cd13831 (HU)
DNA binding site c...

53K

DNA binding site
53K, 55R, 56S, 58R, 60V, 61K, 62N, 63P, 68M, 69I, 71V
CDD
cd13831 (HU)

55R

DNA binding site
53K, 55R, 56S, 58R, 60V, 61K, 62N, 63P, 68M, 69I, 71V
CDD
cd13831 (HU)

56S

DNA binding site
53K, 55R, 56S, 58R, 60V, 61K, 62N, 63P, 68M, 69I, 71V
CDD
cd13831 (HU)

58R

DNA binding site
53K, 55R, 56S, 58R, 60V, 61K, 62N, 63P, 68M, 69I, 71V
CDD
cd13831 (HU)

60V

DNA binding site
53K, 55R, 56S, 58R, 60V, 61K, 62N, 63P, 68M, 69I, 71V
CDD
cd13831 (HU)

61K

DNA binding site
53K, 55R, 56S, 58R, 60V, 61K, 62N, 63P, 68M, 69I, 71V
CDD
cd13831 (HU)

62N

DNA binding site
53K, 55R, 56S, 58R, 60V, 61K, 62N, 63P, 68M, 69I, 71V
CDD
cd13831 (HU)

63P

DNA binding site
53K, 55R, 56S, 58R, 60V, 61K, 62N, 63P, 68M, 69I, 71V
CDD
cd13831 (HU)

68M

DNA binding site
53K, 55R, 56S, 58R, 60V, 61K, 62N, 63P, 68M, 69I, 71V
CDD
cd13831 (HU)

69I

DNA binding site
53K, 55R, 56S, 58R, 60V, 61K, 62N, 63P, 68M, 69I, 71V
CDD
cd13831 (HU)

71V

DNA binding site
53K, 55R, 56S, 58R, 60V, 61K, 62N, 63P, 68M, 69I, 71V
CDD
cd13831 (HU)

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003677 DNA binding

Cellular Component

None predicted.

Filter view on

Entry type

Status

Per-residue features

25586_FusoPortal_Gene_1561

Protein family membership

Homologous superfamilies

Domains and repeats

Detailed signature matches

Residue annotation

GO term prediction

Biological Process

Molecular Function

Cellular Component