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Entry type
Status
Per-residue features
Colour by
25586_FusoPortal_Gene_1903
Length
209 amino acids
Protein family membership
- Ribonuclease HII/HIII (IPR001352)
- Ribonuclease HII (IPR022898)
Homologous superfamilies
-
Homologous superfamily6 - 209
- Ribonuclease H superfamily (IPR036397)
-
Homologous superfamily7 - 198
- Ribonuclease H-like superfamily (IPR012337)
1
20
40
60
80
100
120
140
160
180
209
Domains and repeats
-
Domain16 - 195
- Ribonuclease HII/HIII domain (IPR024567)
1
20
40
60
80
100
120
140
160
180
209
Detailed signature matches
-
-
6 - 209
-
-
-
PTHR10954:SF18 (RIB...)7 - 196
-
cd07182 (RNase_HII_...)16 - 197
-
MF_00052_B (RNase_H...)14 - 199
-
Residue annotation
-
active site cd0718219D20E115D134D
-
RNA/DNA hybrid bin...19DRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)20ERNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)21ARNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)22GRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)23RRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)24GRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)51KRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)85NRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)86IRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)87LRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)115DRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)116GRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)117NRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)131VRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)132KRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)134DRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)148KRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)169KRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)170HRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)171KRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)173YRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)174GRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)175TRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)196FRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)197LRNA/DNA hybrid binding site
19D, 20E, 21A, 22G, 23R, 24G, 51K, 85N, 86I, 87L, 115D, 116G, 117N, 131V, 132K, 134D, 148K, 169K, 170H, 171K, 173Y, 174G, 175T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0004523 RNA-DNA hybrid ribonuclease activity
Cellular Component
None predicted.