25586_FusoPortal_Gene_384

Protein

25586_FusoPortal_Gene_384

Length

99 amino acids

Protein family membership

RNA-binding protein, HP1423 type (IPR025490)

Homologous superfamilies

Homologous superfamily
1 - 88
RNA-binding S4 domain superfamily (IPR036986)

1 10 20 30 40 50 60 70 80 90 99

Domains and repeats

Domain
1 - 60
RNA-binding S4 domain (IPR002942)

1 10 20 30 40 50 60 70 80 90 99

Detailed signature matches

IPR036986

RNA-binding S4 domain superfamily
1. G3DSA:3.10.29...
  
  1 - 88
  
  GENE3D
  G3DSA:3.10.290.10 (G3DSA:3.10.290.10)
IPR025490

RNA-binding protein, HP1423 type
1. PIRSF038881 (RNAbp_...)
  
  1 - 90
  
  PIRSF
  PIRSF038881 (RNAbp_HP1423)
IPR002942

RNA-binding S4 domain
1. cd00165 (S4)
  
  1 - 49
  
  CDD
  cd00165 (S4)
2. PF01479 (S4)
  
  1 - 46
  
  Pfam
  PF01479 (S4)
3. PS50889 (S4)
  
  1 - 60
  
  PROSITE profiles
  PS50889 (S4)

no IPR

Unintegrated signatures

SSF55174 (Alpha-L R...)

1 - 65

SUPERFAMILY
SSF55174 (Alpha-L RNA-binding motif)

Residue annotation

RNA binding surfac...

2R

RNA binding surface
2R, 14K, 15R, 17P, 18I, 20K, 21L, 24D, 25G, 27K, 34V, 35V, 36K, 37A, 38A, 39A, 40E, 42K
CDD
cd00165 (S4)

14K

RNA binding surface
2R, 14K, 15R, 17P, 18I, 20K, 21L, 24D, 25G, 27K, 34V, 35V, 36K, 37A, 38A, 39A, 40E, 42K
CDD
cd00165 (S4)

15R

RNA binding surface
2R, 14K, 15R, 17P, 18I, 20K, 21L, 24D, 25G, 27K, 34V, 35V, 36K, 37A, 38A, 39A, 40E, 42K
CDD
cd00165 (S4)

17P

RNA binding surface
2R, 14K, 15R, 17P, 18I, 20K, 21L, 24D, 25G, 27K, 34V, 35V, 36K, 37A, 38A, 39A, 40E, 42K
CDD
cd00165 (S4)

18I

RNA binding surface
2R, 14K, 15R, 17P, 18I, 20K, 21L, 24D, 25G, 27K, 34V, 35V, 36K, 37A, 38A, 39A, 40E, 42K
CDD
cd00165 (S4)

20K

RNA binding surface
2R, 14K, 15R, 17P, 18I, 20K, 21L, 24D, 25G, 27K, 34V, 35V, 36K, 37A, 38A, 39A, 40E, 42K
CDD
cd00165 (S4)

21L

RNA binding surface
2R, 14K, 15R, 17P, 18I, 20K, 21L, 24D, 25G, 27K, 34V, 35V, 36K, 37A, 38A, 39A, 40E, 42K
CDD
cd00165 (S4)

24D

RNA binding surface
2R, 14K, 15R, 17P, 18I, 20K, 21L, 24D, 25G, 27K, 34V, 35V, 36K, 37A, 38A, 39A, 40E, 42K
CDD
cd00165 (S4)

25G

RNA binding surface
2R, 14K, 15R, 17P, 18I, 20K, 21L, 24D, 25G, 27K, 34V, 35V, 36K, 37A, 38A, 39A, 40E, 42K
CDD
cd00165 (S4)

27K

RNA binding surface
2R, 14K, 15R, 17P, 18I, 20K, 21L, 24D, 25G, 27K, 34V, 35V, 36K, 37A, 38A, 39A, 40E, 42K
CDD
cd00165 (S4)

34V

RNA binding surface
2R, 14K, 15R, 17P, 18I, 20K, 21L, 24D, 25G, 27K, 34V, 35V, 36K, 37A, 38A, 39A, 40E, 42K
CDD
cd00165 (S4)

35V

RNA binding surface
2R, 14K, 15R, 17P, 18I, 20K, 21L, 24D, 25G, 27K, 34V, 35V, 36K, 37A, 38A, 39A, 40E, 42K
CDD
cd00165 (S4)

36K

RNA binding surface
2R, 14K, 15R, 17P, 18I, 20K, 21L, 24D, 25G, 27K, 34V, 35V, 36K, 37A, 38A, 39A, 40E, 42K
CDD
cd00165 (S4)

37A

RNA binding surface
2R, 14K, 15R, 17P, 18I, 20K, 21L, 24D, 25G, 27K, 34V, 35V, 36K, 37A, 38A, 39A, 40E, 42K
CDD
cd00165 (S4)

38A

RNA binding surface
2R, 14K, 15R, 17P, 18I, 20K, 21L, 24D, 25G, 27K, 34V, 35V, 36K, 37A, 38A, 39A, 40E, 42K
CDD
cd00165 (S4)

39A

RNA binding surface
2R, 14K, 15R, 17P, 18I, 20K, 21L, 24D, 25G, 27K, 34V, 35V, 36K, 37A, 38A, 39A, 40E, 42K
CDD
cd00165 (S4)

40E

RNA binding surface
2R, 14K, 15R, 17P, 18I, 20K, 21L, 24D, 25G, 27K, 34V, 35V, 36K, 37A, 38A, 39A, 40E, 42K
CDD
cd00165 (S4)

42K

RNA binding surface
2R, 14K, 15R, 17P, 18I, 20K, 21L, 24D, 25G, 27K, 34V, 35V, 36K, 37A, 38A, 39A, 40E, 42K
CDD
cd00165 (S4)

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003723 RNA binding

Cellular Component

None predicted.

Filter view on

Entry type

Status

Per-residue features

25586_FusoPortal_Gene_384

Protein family membership

Homologous superfamilies

Domains and repeats

Detailed signature matches

Residue annotation

GO term prediction

Biological Process

Molecular Function

Cellular Component