25586_FusoPortal_Gene_404

Protein

25586_FusoPortal_Gene_404

Length

71 amino acids

Protein family membership

RNA-binding S4-related,YaaA (IPR014330)

Homologous superfamilies

Homologous superfamily
1 - 71
RNA-binding S4 domain superfamily (IPR036986)

1 10 20 30 40 50 60 71

Domains and repeats

Domain
14 - 71
RNA-binding S4 domain (IPR002942)

1 10 20 30 40 50 60 71

Detailed signature matches

IPR036986

RNA-binding S4 domain superfamily
1. G3DSA:3.10.29...
  
  1 - 71
  
  GENE3D
  G3DSA:3.10.290.10 (G3DSA:3.10.290.10)
IPR014330

RNA-binding S4-related,YaaA
1. TIGR02988
  
  6 - 64
  
  TIGRFAMs
  TIGR02988 (TIGR02988)
IPR002942

RNA-binding S4 domain
1. cd00165 (S4)
  
  16 - 67
  
  CDD
  cd00165 (S4)
2. PS50889 (S4)
  
  14 - 71
  
  PROSITE profiles
  PS50889 (S4)

no IPR

Unintegrated signatures

PF13275 (S4_2)

7 - 70

Pfam
PF13275 (S4_2)
PTHR32319 (FAMILY N...)

5 - 70

PANTHER
PTHR32319 (FAMILY NOT NAMED)
PTHR32319:SF3 (SUBF...)

5 - 70

PANTHER
PTHR32319:SF3 (SUBFAMILY NOT NAMED)
SSF55174 (Alpha-L R...)

4 - 70

SUPERFAMILY
SSF55174 (Alpha-L RNA-binding motif)

Residue annotation

RNA binding surfac...

27D

RNA binding surface
27D, 28S, 30S, 31D, 33K, 34Q, 37L, 38D, 40K, 47V, 48E, 49T, 50R, 51R, 52G, 53R, 54K, 56Y
CDD
cd00165 (S4)

28S

RNA binding surface
27D, 28S, 30S, 31D, 33K, 34Q, 37L, 38D, 40K, 47V, 48E, 49T, 50R, 51R, 52G, 53R, 54K, 56Y
CDD
cd00165 (S4)

30S

RNA binding surface
27D, 28S, 30S, 31D, 33K, 34Q, 37L, 38D, 40K, 47V, 48E, 49T, 50R, 51R, 52G, 53R, 54K, 56Y
CDD
cd00165 (S4)

31D

RNA binding surface
27D, 28S, 30S, 31D, 33K, 34Q, 37L, 38D, 40K, 47V, 48E, 49T, 50R, 51R, 52G, 53R, 54K, 56Y
CDD
cd00165 (S4)

33K

RNA binding surface
27D, 28S, 30S, 31D, 33K, 34Q, 37L, 38D, 40K, 47V, 48E, 49T, 50R, 51R, 52G, 53R, 54K, 56Y
CDD
cd00165 (S4)

34Q

RNA binding surface
27D, 28S, 30S, 31D, 33K, 34Q, 37L, 38D, 40K, 47V, 48E, 49T, 50R, 51R, 52G, 53R, 54K, 56Y
CDD
cd00165 (S4)

37L

RNA binding surface
27D, 28S, 30S, 31D, 33K, 34Q, 37L, 38D, 40K, 47V, 48E, 49T, 50R, 51R, 52G, 53R, 54K, 56Y
CDD
cd00165 (S4)

38D

RNA binding surface
27D, 28S, 30S, 31D, 33K, 34Q, 37L, 38D, 40K, 47V, 48E, 49T, 50R, 51R, 52G, 53R, 54K, 56Y
CDD
cd00165 (S4)

40K

RNA binding surface
27D, 28S, 30S, 31D, 33K, 34Q, 37L, 38D, 40K, 47V, 48E, 49T, 50R, 51R, 52G, 53R, 54K, 56Y
CDD
cd00165 (S4)

47V

RNA binding surface
27D, 28S, 30S, 31D, 33K, 34Q, 37L, 38D, 40K, 47V, 48E, 49T, 50R, 51R, 52G, 53R, 54K, 56Y
CDD
cd00165 (S4)

48E

RNA binding surface
27D, 28S, 30S, 31D, 33K, 34Q, 37L, 38D, 40K, 47V, 48E, 49T, 50R, 51R, 52G, 53R, 54K, 56Y
CDD
cd00165 (S4)

49T

RNA binding surface
27D, 28S, 30S, 31D, 33K, 34Q, 37L, 38D, 40K, 47V, 48E, 49T, 50R, 51R, 52G, 53R, 54K, 56Y
CDD
cd00165 (S4)

50R

RNA binding surface
27D, 28S, 30S, 31D, 33K, 34Q, 37L, 38D, 40K, 47V, 48E, 49T, 50R, 51R, 52G, 53R, 54K, 56Y
CDD
cd00165 (S4)

51R

RNA binding surface
27D, 28S, 30S, 31D, 33K, 34Q, 37L, 38D, 40K, 47V, 48E, 49T, 50R, 51R, 52G, 53R, 54K, 56Y
CDD
cd00165 (S4)

52G

RNA binding surface
27D, 28S, 30S, 31D, 33K, 34Q, 37L, 38D, 40K, 47V, 48E, 49T, 50R, 51R, 52G, 53R, 54K, 56Y
CDD
cd00165 (S4)

53R

RNA binding surface
27D, 28S, 30S, 31D, 33K, 34Q, 37L, 38D, 40K, 47V, 48E, 49T, 50R, 51R, 52G, 53R, 54K, 56Y
CDD
cd00165 (S4)

54K

RNA binding surface
27D, 28S, 30S, 31D, 33K, 34Q, 37L, 38D, 40K, 47V, 48E, 49T, 50R, 51R, 52G, 53R, 54K, 56Y
CDD
cd00165 (S4)

56Y

RNA binding surface
27D, 28S, 30S, 31D, 33K, 34Q, 37L, 38D, 40K, 47V, 48E, 49T, 50R, 51R, 52G, 53R, 54K, 56Y
CDD
cd00165 (S4)

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003723 RNA binding

Cellular Component

None predicted.

Filter view on

Entry type

Status

Per-residue features

25586_FusoPortal_Gene_404

Protein family membership

Homologous superfamilies

Domains and repeats

Detailed signature matches

Residue annotation

GO term prediction

Biological Process

Molecular Function

Cellular Component