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Entry type
Status
Per-residue features
Colour by
49185_FusoPortal_Gene_3197
Length
527 amino acids
Protein family membership
None predicted.
Homologous superfamilies
-
Homologous superfamily75 - 358
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450
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527
Domains and repeats
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Domain5 - 33
- RNA helicase, DEAD-box type, Q motif (IPR014014)
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Domain29 - 206
- Helicase superfamily 1/2, ATP-binding domain (IPR014001)
- DEAD/DEAH box helicase domain (IPR011545)
217 - 378- Helicase, C-terminal (IPR001650)
451 - 520- DEAD box helicase DbpA/CsdA, RNA-binding domain (IPR005580)
- Helicase superfamily 1/2, ATP-binding domain (IPR014001)
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527
Detailed signature matches

Unintegrated signatures
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519 - 527
-
221 - 3712 - 220
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PTHR24031 (RNA HELI...)6 - 435
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PTHR24031:SF349 (AT...)6 - 435
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cd00268 (DEADc)7 - 204
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cd12252 (RRM_DbpA)451 - 520
Residue annotation
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ATP binding site c...53G54T55G56K57T
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Mg++ binding site ...
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motif III cd00268
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nucleotide binding...251R252T253K254N274H275G300T301D302V
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ATP-binding site c...
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RNA binding site c...458RRNA binding site
458R, 463T, 464P, 465K, 466K, 468V, 469E, 470M, 472T, 473S, 479E, 482L, 483K, 484N, 485V, 514G, 515R, 518L
CDD
cd12252 (RRM_DbpA)463TRNA binding site
458R, 463T, 464P, 465K, 466K, 468V, 469E, 470M, 472T, 473S, 479E, 482L, 483K, 484N, 485V, 514G, 515R, 518L
CDD
cd12252 (RRM_DbpA)464PRNA binding site
458R, 463T, 464P, 465K, 466K, 468V, 469E, 470M, 472T, 473S, 479E, 482L, 483K, 484N, 485V, 514G, 515R, 518L
CDD
cd12252 (RRM_DbpA)465KRNA binding site
458R, 463T, 464P, 465K, 466K, 468V, 469E, 470M, 472T, 473S, 479E, 482L, 483K, 484N, 485V, 514G, 515R, 518L
CDD
cd12252 (RRM_DbpA)466KRNA binding site
458R, 463T, 464P, 465K, 466K, 468V, 469E, 470M, 472T, 473S, 479E, 482L, 483K, 484N, 485V, 514G, 515R, 518L
CDD
cd12252 (RRM_DbpA)468VRNA binding site
458R, 463T, 464P, 465K, 466K, 468V, 469E, 470M, 472T, 473S, 479E, 482L, 483K, 484N, 485V, 514G, 515R, 518L
CDD
cd12252 (RRM_DbpA)469ERNA binding site
458R, 463T, 464P, 465K, 466K, 468V, 469E, 470M, 472T, 473S, 479E, 482L, 483K, 484N, 485V, 514G, 515R, 518L
CDD
cd12252 (RRM_DbpA)470MRNA binding site
458R, 463T, 464P, 465K, 466K, 468V, 469E, 470M, 472T, 473S, 479E, 482L, 483K, 484N, 485V, 514G, 515R, 518L
CDD
cd12252 (RRM_DbpA)472TRNA binding site
458R, 463T, 464P, 465K, 466K, 468V, 469E, 470M, 472T, 473S, 479E, 482L, 483K, 484N, 485V, 514G, 515R, 518L
CDD
cd12252 (RRM_DbpA)473SRNA binding site
458R, 463T, 464P, 465K, 466K, 468V, 469E, 470M, 472T, 473S, 479E, 482L, 483K, 484N, 485V, 514G, 515R, 518L
CDD
cd12252 (RRM_DbpA)479ERNA binding site
458R, 463T, 464P, 465K, 466K, 468V, 469E, 470M, 472T, 473S, 479E, 482L, 483K, 484N, 485V, 514G, 515R, 518L
CDD
cd12252 (RRM_DbpA)482LRNA binding site
458R, 463T, 464P, 465K, 466K, 468V, 469E, 470M, 472T, 473S, 479E, 482L, 483K, 484N, 485V, 514G, 515R, 518L
CDD
cd12252 (RRM_DbpA)483KRNA binding site
458R, 463T, 464P, 465K, 466K, 468V, 469E, 470M, 472T, 473S, 479E, 482L, 483K, 484N, 485V, 514G, 515R, 518L
CDD
cd12252 (RRM_DbpA)484NRNA binding site
458R, 463T, 464P, 465K, 466K, 468V, 469E, 470M, 472T, 473S, 479E, 482L, 483K, 484N, 485V, 514G, 515R, 518L
CDD
cd12252 (RRM_DbpA)485VRNA binding site
458R, 463T, 464P, 465K, 466K, 468V, 469E, 470M, 472T, 473S, 479E, 482L, 483K, 484N, 485V, 514G, 515R, 518L
CDD
cd12252 (RRM_DbpA)514GRNA binding site
458R, 463T, 464P, 465K, 466K, 468V, 469E, 470M, 472T, 473S, 479E, 482L, 483K, 484N, 485V, 514G, 515R, 518L
CDD
cd12252 (RRM_DbpA)515RRNA binding site
458R, 463T, 464P, 465K, 466K, 468V, 469E, 470M, 472T, 473S, 479E, 482L, 483K, 484N, 485V, 514G, 515R, 518L
CDD
cd12252 (RRM_DbpA)518LRNA binding site
458R, 463T, 464P, 465K, 466K, 468V, 469E, 470M, 472T, 473S, 479E, 482L, 483K, 484N, 485V, 514G, 515R, 518L
CDD
cd12252 (RRM_DbpA)
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0005524 ATP binding
Cellular Component
None predicted.