9817_FusoPortal_Gene_1880

Protein

9817_FusoPortal_Gene_1880

Length

90 amino acids

Protein family membership

Histone-like DNA-binding protein (IPR000119)

Homologous superfamilies

Homologous superfamily
1 - 90
Integration host factor (IHF)-like DNA-binding domain superfamily (IPR010992)

1 10 20 30 40 50 60 70 80 90 90

Domains and repeats

None predicted.

Detailed signature matches

IPR010992

Integration host factor (IHF)-like DNA-binding domain superfamily
1. SSF47729 (IHF-like ...)
  
  1 - 90
  
  SUPERFAMILY
  SSF47729 (IHF-like DNA-binding proteins)
2. G3DSA:4.10.52...
  
  1 - 90
  
  GENE3D
  G3DSA:4.10.520.10 (G3DSA:4.10.520.10)
IPR000119

Histone-like DNA-binding protein
1. PF00216 (Bac_DNA_bi...)
  
  1 - 90
  
  Pfam
  PF00216 (Bac_DNA_binding)
2. PR01727 (DNABINDINGHU)
  
  58 - 71
  
  PRINTS
  PR01727 (DNABINDINGHU)
  
  40 - 55
  
  PRINTS
  PR01727 (DNABINDINGHU)
  
  74 - 88
  
  PRINTS
  PR01727 (DNABINDINGHU)
3. PTHR33175 (FAMILY N...)
  
  1 - 90
  
  PANTHER
  PTHR33175 (FAMILY NOT NAMED)

no IPR

Unintegrated signatures

PTHR33175:SF6 (DNA-...)

1 - 90

PANTHER
PTHR33175:SF6 (DNA-BINDING PROTEIN HU-BETA)
cd13831 (HU)

2 - 87

CDD
cd13831 (HU)

Residue annotation

dimer interface cd...

6F

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

9L

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

10Y

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

13K

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

22E

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

23K

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

24N

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

25I

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

27L

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

28F

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

29L

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

31S

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

32V

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

33E

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

35S

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

36L

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

40D

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

41E

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

42V

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

43T

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

44F

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

47W

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

75K

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

76A

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

77V

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

79F

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

81V

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

85L

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)

86A

dimer interface
6F, 9L, 10Y, 13K, 22E, 23K, 24N, 25I, 27L, 28F, 29L, 31S, 32V, 33E, 35S, 36L, 40D, 41E, 42V, 43T, 44F, 47W, 75K, 76A, 77V, 79F, 81V, 85L, 86A
CDD
cd13831 (HU)
DNA binding site c...

53V

DNA binding site
53V, 55R, 56A, 58R, 60V, 61R, 62S, 63P, 68I, 69I, 71V
CDD
cd13831 (HU)

55R

DNA binding site
53V, 55R, 56A, 58R, 60V, 61R, 62S, 63P, 68I, 69I, 71V
CDD
cd13831 (HU)

56A

DNA binding site
53V, 55R, 56A, 58R, 60V, 61R, 62S, 63P, 68I, 69I, 71V
CDD
cd13831 (HU)

58R

DNA binding site
53V, 55R, 56A, 58R, 60V, 61R, 62S, 63P, 68I, 69I, 71V
CDD
cd13831 (HU)

60V

DNA binding site
53V, 55R, 56A, 58R, 60V, 61R, 62S, 63P, 68I, 69I, 71V
CDD
cd13831 (HU)

61R

DNA binding site
53V, 55R, 56A, 58R, 60V, 61R, 62S, 63P, 68I, 69I, 71V
CDD
cd13831 (HU)

62S

DNA binding site
53V, 55R, 56A, 58R, 60V, 61R, 62S, 63P, 68I, 69I, 71V
CDD
cd13831 (HU)

63P

DNA binding site
53V, 55R, 56A, 58R, 60V, 61R, 62S, 63P, 68I, 69I, 71V
CDD
cd13831 (HU)

68I

DNA binding site
53V, 55R, 56A, 58R, 60V, 61R, 62S, 63P, 68I, 69I, 71V
CDD
cd13831 (HU)

69I

DNA binding site
53V, 55R, 56A, 58R, 60V, 61R, 62S, 63P, 68I, 69I, 71V
CDD
cd13831 (HU)

71V

DNA binding site
53V, 55R, 56A, 58R, 60V, 61R, 62S, 63P, 68I, 69I, 71V
CDD
cd13831 (HU)

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003677 DNA binding

Cellular Component

None predicted.

Filter view on

Entry type

Status

Per-residue features

9817_FusoPortal_Gene_1880

Protein family membership

Homologous superfamilies

Domains and repeats

Detailed signature matches

Residue annotation

GO term prediction

Biological Process

Molecular Function

Cellular Component