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Entry type
Status
Per-residue features
Colour by
9817_FusoPortal_Gene_837
Length
206 amino acids
Protein family membership
- Ribonuclease HII/HIII (IPR001352)
- Ribonuclease HII (IPR022898)
Homologous superfamilies
-
Homologous superfamily2 - 206
- Ribonuclease H superfamily (IPR036397)
-
Homologous superfamily14 - 197
- Ribonuclease H-like superfamily (IPR012337)
1
20
40
60
80
100
120
140
160
180
206
Domains and repeats
-
Domain18 - 198
- Ribonuclease HII/HIII domain (IPR024567)
1
20
40
60
80
100
120
140
160
180
206
Detailed signature matches
-
-
2 - 206
-
-
-
PTHR10954:SF18 (RIB...)11 - 196
-
cd07182 (RNase_HII_...)18 - 197
-
MF_00052_B (RNase_H...)16 - 199
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Residue annotation
-
active site cd0718221D22E116D135D
-
RNA/DNA hybrid bin...21DRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)22ERNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)23ARNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)24GRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)25RRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)26GRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)53KRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)87NRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)88IRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)89LRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)116DRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)117GRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)118NRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)132IRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)133KRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)135DRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)149KRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)170KRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)171HRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)172KRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)174YRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)175GRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)176TRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)196FRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)197LRNA/DNA hybrid binding site
21D, 22E, 23A, 24G, 25R, 26G, 53K, 87N, 88I, 89L, 116D, 117G, 118N, 132I, 133K, 135D, 149K, 170K, 171H, 172K, 174Y, 175G, 176T, 196F, 197L
CDD
cd07182 (RNase_HII_bacteria_HII_like)
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0004523 RNA-DNA hybrid ribonuclease activity
Cellular Component
None predicted.