F. necrophorum 1_1_36S_FusoPortal_Gene_109

InterPro predicted function: "Transcription regulator HTH
InterPro Accessions: IPR000524;IPR004839

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_109.out

Amino Acids: 464

ORF FASTA file - Amino Acids

MMIFSLDNNSKTPLYIQMYTEIKKQIQNGNFRADERLPSKKNFMEHYHISQSTVQNALYL LLEEGYIYSIERRGYFVANVENMVTTPFLCEHKTKEENIQKIKYDFAYSGVDAQSIPKTI FKRITRDIYEEQNEDLLFQGDIQGYFPLRESICQYLLNSRGFSVNPSQIIISSGIEYLFY IIFKIFEKKIYGLENPGYKMLRELFASNQIEFYPISLDESGIMVEELKKRRIQIACITPS HQFPTGVIMPIQRRNELLHWANSSEEHYIVEDDYDSEFKYNGRPIPALKAIDQKDKVIYM GSFSKSISPAIRVSYMVLPKNLLNIYEKKLPYFICPVSTLSQKMLYKFIAEGHFVKHLNR MRTLYKQKREFVVQCFKKTNITILGADAGLHLLLSFPYFLDEEKFLEECRKHYVRIYSIR EYYFQDKPSQNSIFLLGYASLQKEQIQEGISILLKLLEKHKHIL

Coding DNA - Genome Coordinates: 111351-109957 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGATGATATTCTCTTTGGACAATAATAGTAAAACTCCTCTATACATTCAGATGTATACAGAAATTAAGA AACAAATTCAAAACGGAAATTTTCGTGCGGATGAGAGGCTTCCTTCGAAAAAAAATTTTATGGAACACTA TCACATTAGTCAAAGTACAGTTCAGAACGCTCTATATCTTTTATTGGAAGAAGGCTACATTTATTCGATA GAAAGGCGAGGCTATTTTGTTGCCAATGTTGAAAATATGGTAACAACTCCTTTTCTCTGCGAACATAAGA CAAAAGAGGAAAATATACAGAAAATAAAGTATGACTTTGCTTATTCCGGGGTAGATGCTCAAAGTATTCC TAAAACCATTTTTAAAAGAATTACACGGGATATTTATGAGGAACAAAATGAGGATCTCTTATTTCAGGGA GATATTCAAGGATATTTTCCGCTTCGGGAAAGTATTTGTCAGTACCTATTGAATTCCAGAGGTTTTTCTG TCAATCCGAGTCAAATTATCATTAGTTCCGGAATAGAATACCTCTTCTATATTATTTTTAAAATATTTGA AAAAAAAATTTATGGTCTGGAAAATCCCGGTTATAAGATGTTACGAGAATTATTTGCATCCAATCAAATA GAATTTTATCCGATTTCTTTAGATGAATCTGGAATAATGGTGGAAGAATTGAAAAAACGGAGGATTCAGA TTGCCTGTATCACTCCTTCACACCAATTCCCTACCGGAGTTATTATGCCAATTCAGCGTAGAAATGAACT TTTACATTGGGCAAATTCTTCTGAAGAACATTATATTGTAGAAGATGATTATGACAGTGAATTTAAATAC AATGGGAGACCCATTCCCGCTCTAAAAGCTATTGATCAAAAAGATAAAGTGATCTACATGGGAAGTTTTT CAAAATCTATCAGTCCGGCTATCCGAGTAAGCTATATGGTATTACCTAAAAATTTACTCAATATTTATGA AAAAAAACTTCCTTATTTTATTTGTCCGGTTTCCACATTAAGTCAAAAAATGTTATATAAGTTCATTGCA GAAGGACATTTTGTAAAGCATCTAAATCGTATGAGAACCCTTTATAAACAGAAAAGAGAGTTCGTTGTAC AATGTTTTAAAAAAACAAATATTACAATTTTAGGAGCCGATGCCGGCCTTCATTTGCTGTTAAGTTTTCC TTACTTTTTAGATGAGGAGAAATTTTTAGAAGAGTGTCGAAAACACTATGTTCGTATATATTCGATACGT GAATATTATTTTCAAGATAAGCCTTCTCAAAATTCGATTTTTCTTTTGGGATATGCAAGCTTGCAAAAAG AACAAATACAGGAGGGAATCTCTATTCTATTAAAACTTTTGGAGAAACATAAACATATTCTATGA

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