F. necrophorum 1_1_36S_FusoPortal_Gene_1102

InterPro predicted function: "RNA polymerase sigma factor 54 interaction domain;DNA binding HTH domain
InterPro Accessions: IPR002078;IPR002197;IPR013767

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1102.out

Amino Acids: 468

ORF FASTA file - Amino Acids

MRYEEKNRYQYIFNKVFDMSEDGFIVVDPQGIVTDINERYCNFFKTTKEQVIGKSILNII PNSKMLDIVSKTYTEESVVHTYIAGAPAGEKVIVSRSYVEDEVGKVIAGVAQVKFKVASL ETTKRLLEEYSTLNYYKEQYTALQKSNYGFDSIIGNDTNFVMQKLKSLKVAKTSFSILLT GETGTGKEVFARAIHNSSERSKNPMISINCAAIPNDLLESELFGYEEGAFTGAKKGGKKG KFLLANRSTIFLDEIGDMPLPMQAKLLRVLEEKKIDPIGSIKSIPVDIRVISATKKNLQK MVLDGEFREDLFYRLNVINIEMIPLRNRRDDILLLSEYFLNKLNNEYRTNIAFSPEVQLC FYSYDWPGNIRELDNVIKSAYAVCNENFIQIPDLPSRIVEFINHDSISPQKLSYHEAMNQ YQEKLLKYYLKQSKGNIQKAAKLSKIHPSLFYKKIQKYQLNKHKFTED

Coding DNA - Genome Coordinates: 1141269-1139863 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGAGGTATGAAGAAAAAAATCGATATCAATATATTTTTAATAAAGTATTTGACATGAGTGAAGACGGAT TTATTGTAGTAGATCCCCAAGGAATCGTTACAGATATCAACGAAAGATATTGTAATTTTTTTAAAACTAC AAAAGAGCAAGTAATCGGCAAAAGTATTTTAAATATCATTCCCAATTCCAAAATGTTAGATATCGTCAGC AAGACTTATACGGAAGAAAGTGTTGTTCATACCTATATTGCCGGAGCCCCGGCAGGAGAAAAAGTTATTG TTAGTCGATCCTATGTAGAAGATGAAGTTGGAAAAGTTATTGCAGGGGTTGCTCAAGTAAAATTCAAAGT TGCAAGTTTAGAGACTACCAAGAGACTTCTAGAAGAATATTCTACTTTGAATTATTATAAAGAGCAGTAT ACCGCTTTACAAAAAAGCAATTATGGATTTGATTCTATCATTGGGAATGATACAAATTTTGTCATGCAAA AATTAAAAAGTTTAAAAGTAGCCAAAACTTCCTTTTCTATTCTATTAACGGGAGAAACAGGAACAGGGAA AGAAGTTTTTGCTCGTGCAATTCATAACAGCAGTGAGCGTAGTAAAAATCCTATGATTAGTATTAACTGT GCCGCTATTCCTAATGATTTACTGGAATCTGAACTTTTTGGTTATGAAGAAGGAGCTTTTACAGGAGCTA AAAAAGGAGGGAAAAAAGGAAAATTTTTATTGGCAAATCGTTCCACTATTTTCTTAGATGAAATCGGAGA TATGCCTCTTCCTATGCAGGCAAAATTGCTTCGAGTTTTGGAAGAAAAAAAGATAGATCCTATTGGATCC ATAAAATCTATCCCTGTTGATATTCGTGTTATTTCAGCTACAAAAAAGAATTTACAAAAAATGGTTTTAG ACGGAGAATTTCGAGAAGATCTATTCTATAGGCTCAACGTCATTAATATTGAAATGATTCCTCTTCGTAA TCGACGAGATGATATCCTGCTTTTATCAGAATACTTCTTAAATAAACTAAATAATGAATACAGAACTAAT ATTGCTTTTTCTCCTGAGGTTCAACTCTGCTTTTATTCTTATGATTGGCCTGGGAATATACGAGAACTTG ATAATGTAATAAAAAGTGCCTATGCGGTTTGTAATGAAAATTTTATTCAAATTCCCGATTTGCCGTCAAG AATTGTAGAGTTTATCAATCATGATTCTATAAGCCCTCAAAAATTAAGTTATCATGAAGCTATGAATCAA TACCAAGAAAAGTTATTGAAATATTACTTGAAACAAAGCAAGGGAAATATACAAAAAGCTGCAAAATTAT CAAAAATTCATCCAAGTCTGTTTTATAAAAAAATCCAAAAATATCAGTTAAATAAACATAAATTTACAGA AGACTAA

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