F. necrophorum 1_1_36S_FusoPortal_Gene_113

InterPro predicted function: ABC transporter periplasmic binding domain
InterPro Accessions: IPR002491

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_113.out

Amino Acids: 316

ORF FASTA file - Amino Acids

MSAGVMMKKILTILFMVLSTTILAFTNTQEINGVKYTFDFKEAPKRAVSISQFTTEIMLK LGLADQMIGTAFLEEEIYPSVAASYKKVPVLAEKWPSLEQLLAKNPDFVTGWEVAFKKGV DSKMLHRSKINMFVPKSSISFDADLDTLFEDYRMFGKIFQKEKEVEKYITSEKARVEKIK KDVKNKEEFTYFLYDSGTDKAFTVFEGFTTNLLKLVHGKNILSGKGVQKTWGETSWEAVI AEDPDYFIIVDYSVGIREETDSDSKIEAIKANPKLKNLKAVKNNKFIRVKLAEICPGIRN VDFFERVSKEVYKIHG

Coding DNA - Genome Coordinates: 115210-114260 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGAGCGCGGGGGTAATGATGAAAAAAATACTGACAATATTATTTATGGTTTTGAGTACTACGATACTTG CTTTTACAAATACGCAAGAAATTAATGGAGTAAAATATACATTCGACTTTAAGGAAGCTCCGAAAAGAGC TGTGAGTATTTCACAATTTACAACAGAAATTATGTTGAAATTGGGATTGGCAGATCAAATGATAGGGACG GCATTTTTGGAAGAGGAAATTTATCCCAGTGTGGCAGCTTCTTATAAAAAAGTACCTGTGTTAGCAGAGA AATGGCCTTCTTTAGAACAACTATTAGCGAAGAATCCGGACTTTGTGACCGGATGGGAAGTTGCGTTTAA AAAAGGTGTCGATTCTAAAATGCTTCATAGAAGTAAAATTAATATGTTTGTTCCAAAATCATCTATTTCT TTTGATGCGGATTTGGATACTTTATTTGAAGATTATAGAATGTTCGGAAAAATCTTTCAGAAAGAGAAAG AAGTAGAAAAATATATTACTTCTGAAAAAGCCAGAGTAGAAAAGATAAAAAAAGATGTAAAGAATAAAGA GGAATTTACTTATTTTCTTTATGATTCAGGAACCGACAAAGCTTTTACCGTTTTTGAGGGATTTACAACG AATTTATTGAAATTGGTACATGGAAAAAATATTTTGTCCGGAAAAGGAGTTCAAAAAACTTGGGGAGAAA CCAGCTGGGAGGCTGTCATTGCTGAGGACCCGGATTATTTCATTATTGTGGATTACAGTGTGGGAATTCG GGAAGAAACAGATTCTGACAGTAAAATTGAAGCTATTAAGGCAAATCCGAAATTAAAGAATTTAAAAGCT GTCAAAAATAATAAATTCATTCGAGTAAAATTAGCAGAAATTTGTCCCGGAATTCGAAATGTTGATTTCT TTGAAAGAGTGTCAAAGGAAGTATATAAGATTCATGGATAA

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