F. necrophorum 1_1_36S_FusoPortal_Gene_1136

InterPro predicted function: "Shikimate dehydrogenase substrate binding
InterPro Accessions: noIPR

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1136.out

Amino Acids: 264

ORF FASTA file - Amino Acids

MDKFWDYFSSEQKFNLFLGEEYCAYDQSPSRKELAAFLLDKLPESLRHRIRNKESLSEIS QDLLDLAIFSRSNLIKTVEEFLKNISLDFSCYASILENKRFQSIISMNLFLPLEREFHEK LHPIFPFSESEKEKTNKLAFYRILGCMTQGDKVFLTSQDIKKLRILSFYQSFWSQLRKEL MERPTILLGMDLENTDVQEILGFLLEEIHYEKQAVYLVTSSSILSSKVANFINKYDIKLL TKNMDSFQENFNKKVVDVQKQFVR

Coding DNA - Genome Coordinates: 1172666-1171872 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGGATAAATTTTGGGATTATTTTTCTTCCGAACAAAAATTTAATCTCTTTTTAGGAGAAGAATACTGTG CTTATGACCAAAGTCCTTCCAGAAAAGAATTAGCCGCTTTTCTGCTGGACAAGCTTCCGGAATCTCTAAG ACATCGAATCCGTAATAAAGAATCTCTATCAGAAATTAGTCAAGATCTTTTAGATTTGGCTATTTTTTCC AGAAGCAATTTAATCAAAACTGTAGAAGAATTTCTAAAAAATATATCTTTGGATTTTTCTTGTTATGCTT CTATTTTAGAAAATAAGCGTTTTCAATCCATTATCAGTATGAATTTATTTCTTCCTTTGGAACGAGAATT TCATGAAAAATTGCATCCTATTTTTCCTTTTTCAGAATCGGAAAAAGAAAAGACGAATAAATTAGCCTTT TATAGAATTTTAGGCTGTATGACACAAGGAGACAAAGTTTTTTTAACATCACAGGATATTAAAAAATTAA GAATATTATCTTTTTATCAATCTTTCTGGTCTCAACTTCGAAAAGAATTGATGGAACGTCCTACGATTTT ATTGGGAATGGATCTGGAAAATACAGATGTACAAGAAATTCTCGGCTTTTTATTGGAAGAAATTCACTAT GAAAAGCAAGCTGTTTATCTCGTGACATCTTCTTCCATTTTGAGTTCAAAAGTGGCAAATTTTATCAATA AATATGATATTAAACTGCTCACCAAAAATATGGACTCGTTTCAGGAAAATTTCAACAAGAAAGTTGTTGA TGTCCAAAAACAGTTTGTGAGGTAG

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