F. necrophorum 1_1_36S_FusoPortal_Gene_1142

InterPro predicted function: "Shikimate dehydrogenase substrate binding
InterPro Accessions: IPR013708

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1142.out

Amino Acids: 267

ORF FASTA file - Amino Acids

MKRYALLGKKLSHSFSKLVHEYIFQKFSWDASYSFWELEEKDIEKAIPLAKEKKLDGFNI TVPYKECLLSQIDSIDESARRIGAINTIVKENNKMIGYNTDCFGFQKMLEYFAIDVDTKK IVILGTGGASKAVAEALRLLGAASIQFVSRSPAGAQLSYGEYLEGDILINTTPVGMYPDK SGSPISKEVFSHFSTAIDLIYNPKETQFLSDAKSFGLFSINGLFMLVAQAIRSEEIWFHK RFDISLYHEVYSYLEGIIYENYGNSRS

Coding DNA - Genome Coordinates: 1180470-1179667 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGAAGAGATATGCACTACTGGGAAAAAAATTATCTCATTCCTTTTCCAAACTTGTTCATGAATATATCT TTCAGAAATTTTCTTGGGATGCTTCCTATTCCTTTTGGGAATTGGAAGAAAAGGACATAGAAAAAGCAAT TCCACTGGCAAAAGAGAAAAAGTTGGACGGTTTTAATATCACAGTTCCCTATAAAGAATGTCTACTTTCT CAGATTGACAGTATAGATGAATCTGCAAGACGGATTGGAGCAATCAATACCATTGTAAAAGAAAATAATA AAATGATTGGCTATAACACCGATTGCTTCGGTTTTCAAAAAATGTTGGAGTACTTTGCCATAGATGTTGA TACAAAAAAAATTGTCATTTTGGGAACCGGAGGAGCCTCCAAAGCTGTTGCGGAAGCTCTTCGACTTTTA GGAGCGGCATCCATTCAATTTGTGAGTCGTTCTCCGGCGGGAGCACAACTTTCTTATGGCGAATATCTGG AAGGAGATATTCTTATCAATACGACTCCGGTGGGAATGTATCCCGATAAGAGCGGAAGTCCTATTTCCAA AGAGGTCTTTTCTCATTTTAGTACTGCCATCGATCTCATTTATAATCCAAAGGAAACACAATTTTTATCG GATGCGAAGTCATTCGGACTTTTCTCAATCAATGGACTTTTTATGCTCGTAGCCCAGGCAATTCGCTCGG AAGAAATTTGGTTCCATAAAAGATTTGACATTTCTCTATACCATGAGGTATATTCATATTTGGAGGGGAT AATCTATGAAAATTATGGTAATTCACGGTCCTAA

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