F. necrophorum 1_1_36S_FusoPortal_Gene_1223

InterPro predicted function: ABC transporter permease protein domain;MacB-like periplasmic core domain
InterPro Accessions: IPR003838;IPR025857

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1223.out

Amino Acids: 400

ORF FASTA file - Amino Acids

MTKRQMYIKLVVNSLIRRKARMIVALLAIAIGATIMSGLVTIYYDIPRQLGKEFRSYGAN FVILPSGNEKISEEEFQRLKSKIMLHSVVGVAPYRYETTKINQQPYILTGTDMVEVKNNS PFWYIEGEWTTNEDSSNVMIGKEISKKLNLQIGDTFTVEGPKAGSKVVASKQSDSAEASK KKDLGSNFYAKKLSVKGIITTGGAEESFIFLPITLLGEILEDVIQIDGIECSVEADSQQL NLLAETLENYDKNIIARPVKRVTQSQDIVLGKLQVLVLLVNIVVLVLTMISVSTTMMAVV AERRKEIGLKKALGAYNNEIRKEFLGEGSALGFIGGILGVGLGFLFAQEVSLNVFGRAIE FQWLFAPITVIVSMLITTLACLYPVKKAMEIEPALVLKGE

Coding DNA - Genome Coordinates: 1278686-1279888 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGACAAAAAGACAAATGTATATCAAGCTTGTAGTGAATTCTCTTATCCGAAGAAAAGCAAGAATGATCG TTGCCTTATTGGCAATTGCAATTGGAGCGACCATTATGTCGGGACTTGTTACCATTTATTACGACATTCC CAGACAACTTGGAAAAGAATTCCGTTCCTATGGAGCAAACTTTGTGATCCTGCCAAGTGGAAATGAAAAA ATTTCGGAAGAAGAATTTCAAAGATTGAAATCAAAAATTATGCTACACAGCGTAGTAGGGGTTGCTCCTT ATCGTTATGAAACGACAAAAATCAACCAACAGCCCTATATTTTAACGGGAACTGATATGGTCGAAGTCAA GAATAACAGTCCTTTCTGGTATATTGAGGGAGAATGGACAACGAACGAGGATAGCAGCAATGTGATGATT GGAAAAGAAATTTCAAAAAAGTTAAATCTACAAATAGGAGATACTTTTACTGTCGAAGGGCCGAAGGCAG GAAGCAAAGTAGTTGCTTCAAAACAGTCCGATTCGGCGGAAGCAAGTAAGAAAAAAGATTTGGGTTCCAA TTTTTATGCAAAAAAACTAAGCGTTAAGGGAATTATTACGACAGGAGGAGCTGAAGAATCCTTCATTTTC TTGCCCATTACTCTTCTAGGGGAAATTTTGGAAGATGTGATCCAAATTGACGGAATTGAATGCTCCGTGG AAGCAGATTCTCAACAATTGAATCTCTTGGCGGAGACTTTGGAAAACTATGATAAAAATATTATCGCCAG ACCTGTAAAAAGAGTGACTCAATCCCAAGATATTGTTTTGGGAAAATTACAAGTTTTGGTTTTATTAGTC AATATTGTGGTTTTGGTCTTAACGATGATTTCCGTCAGTACCACAATGATGGCAGTGGTTGCGGAACGAA GAAAAGAAATCGGATTAAAAAAGGCTTTAGGTGCCTATAATAACGAAATTAGAAAAGAATTTTTAGGAGA AGGTTCTGCTTTGGGATTTATTGGAGGGATTTTAGGAGTTGGTTTAGGATTCTTATTTGCTCAGGAAGTA AGTTTAAATGTATTCGGAAGAGCCATTGAATTTCAGTGGCTGTTTGCACCGATTACCGTCATTGTATCCA TGTTAATTACGACACTTGCCTGTTTGTATCCTGTAAAAAAAGCAATGGAAATAGAGCCTGCATTGGTGTT GAAAGGGGAATAA

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