F. necrophorum 1_1_36S_FusoPortal_Gene_1266

InterPro predicted function: "DNA-binding HTH domain
InterPro Accessions: IPR001647

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1266.out

Amino Acids: 210

ORF FASTA file - Amino Acids

MKEEKQKVGQIRKKEIRDAAKRCFLKKGFQNTTMEDVITEIGMSRGGVYHHYANTNEMLK DLMLDGNHYRNGLIHEYLENNQGKDKYQQMSDILVDKSLANTDLMSLYTLLLQAKNYHED LEKLYQELKINTTNELSIIAKQLGIKADIFHDDFLVNYINGVILSAEILCARNSYGKYKK YIKESIISYIVDVELLFSIEAQNKKEDINF

Coding DNA - Genome Coordinates: 1330426-1329794 | Orientation: Reverse

ORF FASTA file - Coding DNA

TTGAAAGAAGAAAAACAAAAGGTTGGGCAGATTAGAAAAAAAGAGATTCGAGACGCTGCAAAAAGATGCT TTCTAAAGAAAGGATTTCAAAATACGACCATGGAAGATGTGATTACGGAGATAGGCATGAGTAGAGGAGG GGTCTATCATCACTATGCAAATACAAATGAAATGTTGAAAGATTTAATGCTTGATGGGAATCATTATAGA AATGGATTAATACATGAATATTTAGAAAATAATCAAGGGAAGGATAAATATCAGCAAATGAGTGATATTT TAGTGGATAAATCTCTGGCGAATACTGATTTAATGAGCTTATATACACTTCTTTTGCAAGCTAAAAACTA TCATGAAGATTTAGAGAAATTGTATCAGGAACTGAAGATCAATACCACGAATGAGCTTAGTATAATTGCA AAGCAACTTGGAATTAAAGCTGATATATTTCATGATGATTTTTTGGTGAACTATATCAATGGAGTGATAC TAAGTGCAGAGATTCTTTGTGCAAGAAATTCTTATGGCAAGTATAAAAAATATATAAAAGAAAGCATCAT AAGTTACATAGTTGATGTTGAATTGCTTTTTTCAATCGAAGCCCAGAATAAAAAAGAAGATATAAATTTT TGA

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