F. necrophorum 1_1_36S_FusoPortal_Gene_1272

InterPro predicted function: "DNA-binding HTH domain
InterPro Accessions: IPR001647

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1272.out

Amino Acids: 190

ORF FASTA file - Amino Acids

MAQVLKEEVKNRILSAAEKVFYEKDYRSAKLTEIAEEADIPVALIYTYFPNKEKLFEAIV SSVYLNFAPAFAEEEALEEGTASERFDEVGEKYIHELLKERKKLIILMDKSSGTKHEKAK DELIAQMQKHIEVSFQRQGKEKYNPMLAHILASNFTEGLLEIARHYQSEKWAKNMLKLMA QCYYKGVESL

Coding DNA - Genome Coordinates: 1335050-1335622 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGGCTCAAGTTTTAAAGGAAGAAGTGAAAAATAGGATTCTCAGTGCAGCGGAAAAAGTGTTTTATGAAA AAGATTATCGAAGTGCCAAGCTCACAGAGATTGCAGAAGAAGCCGACATTCCTGTTGCTCTTATCTATAC CTATTTTCCAAACAAAGAAAAACTGTTTGAGGCAATTGTAAGTTCCGTATATTTAAATTTTGCTCCCGCT TTTGCAGAAGAAGAAGCTTTGGAAGAGGGAACAGCATCGGAAAGATTTGATGAAGTCGGAGAAAAATATA TTCATGAATTATTAAAAGAACGTAAAAAGCTTATTATTCTGATGGATAAGAGTTCAGGAACCAAGCATGA GAAAGCAAAGGATGAATTGATTGCACAAATGCAAAAACATATTGAAGTCAGCTTTCAAAGGCAAGGCAAA GAGAAATACAATCCTATGCTCGCCCATATTCTAGCAAGCAATTTCACAGAAGGACTGCTTGAGATAGCAA GGCACTATCAAAGCGAAAAGTGGGCTAAAAATATGTTGAAACTGATGGCACAATGCTATTATAAAGGGGT AGAATCCTTATAA

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