F. necrophorum 1_1_36S_FusoPortal_Gene_1284

InterPro predicted function: Cro/C1-type helix-turn-helix domain
InterPro Accessions: noIPR

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1284.out

Amino Acids: 468

ORF FASTA file - Amino Acids

MQLTKEQQIIVNSPLKDITVNSGPGMGKTTLLLEITKKEQNKKHLILCFNSSVKQEIQEK INKNNIKNAEVMTFHSLAFSFFKEKNHIENFRNRNFNINLNYFSIYSILYKLGLVENLED EFIPQILDFFHKYTQSEKRIIDIISKESVLYPIISKVMNYLIKNKDAPMFHELYIKIFQL MKPKVSYDVILIDEFQDVTPCYLSIIKSISEGKKVVKVGDNLQKIYGYNGAIGISSFNYS LTESFRVGKANMDFCNQLVQKILDTNIYDVKGSNPNQKIVKEQKRKVVKIYRTNKNMLQE IIETAKQEKICAFSQSIFDLFQLFLELLKIEKHPVIYQGITVFSMLQLKKILKITEDSHL KLFFALAKKYKTALEENIKNVLNFSVPETVTDDYDVKFITSHRCKGMEFKHVELANDFIP FDKIQKDFLEKRDVTKLDELYILYVALTRSFETLKLNFDLEKYKDSIC

Coding DNA - Genome Coordinates: 1343523-1342117 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGCAACTAACGAAGGAACAACAAATAATTGTTAATTCTCCTTTAAAAGACATCACGGTAAATAGTGGAC CAGGAATGGGAAAGACAACTTTGTTGTTAGAAATAACAAAAAAAGAACAAAATAAAAAACATTTAATTTT ATGTTTTAATAGCAGCGTAAAGCAAGAAATACAAGAAAAAATAAATAAAAATAATATAAAAAATGCCGAA GTAATGACATTTCATTCTTTGGCATTTTCTTTTTTTAAAGAAAAAAACCATATAGAAAATTTTAGAAACC GAAACTTTAATATAAATTTGAACTATTTTTCTATCTATTCTATTCTATATAAACTAGGATTAGTTGAAAA CTTAGAAGACGAGTTCATTCCTCAAATTTTAGATTTTTTTCATAAGTATACCCAAAGCGAAAAAAGAATT ATAGATATTATTTCTAAAGAGTCTGTATTATATCCTATTATTTCCAAAGTAATGAATTATTTGATAAAAA ATAAAGACGCTCCGATGTTTCATGAGTTATATATTAAAATATTTCAGTTAATGAAACCTAAAGTTTCTTA TGATGTTATTTTAATTGATGAATTTCAAGATGTAACCCCTTGTTACCTTTCTATTATAAAAAGTATTTCC GAAGGAAAAAAAGTTGTAAAAGTAGGGGATAATCTACAAAAAATTTATGGATATAACGGAGCAATAGGGA TCTCAAGCTTTAACTATTCATTAACGGAATCGTTCAGGGTCGGAAAAGCAAATATGGATTTTTGCAATCA ATTAGTACAAAAAATCTTAGATACTAATATATACGATGTAAAAGGGAGCAATCCAAATCAAAAAATTGTA AAAGAACAAAAAAGAAAAGTAGTAAAAATTTACAGAACAAATAAAAATATGTTGCAAGAAATTATAGAAA CTGCAAAGCAAGAAAAAATTTGTGCATTTTCGCAATCTATATTTGATTTATTTCAACTTTTCTTAGAATT ATTAAAAATAGAAAAACATCCTGTTATATACCAAGGAATTACAGTTTTTTCTATGTTGCAACTAAAAAAA ATTTTGAAAATCACAGAAGATTCTCATTTAAAATTGTTTTTTGCACTTGCAAAAAAATATAAAACAGCAT TAGAAGAAAATATAAAAAACGTATTAAATTTTTCGGTACCGGAAACAGTGACTGACGACTATGATGTAAA GTTCATTACTTCTCATAGATGCAAAGGAATGGAATTTAAACATGTAGAATTAGCAAATGATTTTATCCCT TTTGATAAAATTCAAAAAGATTTTTTAGAAAAAAGAGATGTGACAAAATTAGATGAATTATACATTCTAT ATGTAGCATTAACAAGAAGTTTTGAAACTTTGAAATTAAATTTTGATTTAGAAAAATATAAGGATTCAAT ATGTTAA

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