F. necrophorum 1_1_36S_FusoPortal_Gene_1289

InterPro predicted function: Reverse transcriptase domain
InterPro Accessions: IPR000477

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1289.out

Amino Acids: 303

ORF FASTA file - Amino Acids

MEFTIYDVLKFNPFIIKKILANKDKYYKIFIIKQRNGKTRQITAPVRELKVLQKNILKSL LEKMEYSKFAKAYTKQKSIKDNANFHQKQALVICLDIKNFFDNIRFNSVKDVFQKISIGK AEILAEICTYHGKLPQGGVTSPYLSNLIMEPIDKKISNFCFKYDLNYTRYADDITISTHL LSKNERERFVKLVIENINNILSEYSFTLNEKKIKVQYAYQQQRVTGIIVNNTMQVPKEYR MKIRQEIYYIKKYGLDSHLMRNHQEKQKYINILKGKINYVLFVNPKDEKMKEYLHYIENH LRC

Coding DNA - Genome Coordinates: 1346362-1345451 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGGAATTTACAATATATGATGTTTTAAAATTTAACCCTTTTATTATTAAAAAAATATTAGCGAATAAAG ATAAATATTACAAAATTTTTATAATAAAACAGAGAAATGGAAAAACAAGACAAATTACAGCTCCGGTTCG TGAATTAAAAGTTCTTCAAAAAAATATTTTAAAAAGTCTTTTAGAGAAAATGGAATATAGTAAATTTGCC AAAGCATATACAAAACAAAAATCCATTAAAGATAACGCTAATTTCCATCAAAAACAAGCATTAGTTATTT GTTTAGATATTAAAAACTTCTTTGATAATATTCGTTTTAATTCTGTAAAAGATGTTTTTCAAAAAATATC TATAGGAAAAGCGGAAATATTAGCGGAAATATGTACTTATCACGGAAAATTACCCCAAGGCGGCGTAACC AGTCCGTATCTATCTAATTTAATCATGGAACCAATTGATAAGAAAATATCTAATTTTTGTTTCAAATATG ATTTGAACTATACCAGATATGCAGATGATATTACTATTTCCACTCATCTCTTATCAAAAAATGAAAGAGA ACGTTTTGTAAAATTAGTAATTGAAAATATTAATAATATATTATCTGAATATTCGTTTACACTGAATGAA AAAAAGATTAAAGTTCAATATGCTTATCAACAACAAAGAGTAACCGGCATTATTGTGAATAATACCATGC AAGTACCAAAAGAATATAGAATGAAAATTCGTCAAGAAATCTACTATATTAAAAAATACGGTTTAGATTC TCATTTAATGAGAAATCATCAAGAAAAACAAAAATATATAAATATATTAAAAGGTAAAATAAATTATGTT CTATTCGTCAATCCAAAAGATGAAAAAATGAAGGAATATTTACATTATATAGAAAATCATTTAAGATGTT AG

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