F. necrophorum 1_1_36S_FusoPortal_Gene_1313

InterPro predicted function: "Zinc finger
InterPro Accessions: IPR002694;IPR013264;noIPR

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1313.out

Amino Acids: 544

ORF FASTA file - Amino Acids

MPTSIEELMQLLKEKTLQYAMEMGVQINGSGFARCLSGTHEDRNPSMHYWEEKGIFHCFS CSFVADIFTLCNKLEQKPMNGPDFIEDNVFYLANKYGIPYEHLRKTLTPEEHKKHILLRT MKTFAEYVVSHVREDYLQQRNITKETAKKLCIGSVPNYQELENYMLSQQCDLNVMKEIGI KQGFINENKLIFIIKDHWNRPVSFVSRNMNPNVNGPKYINGLETSIYEKRKIFFNWNNIK REFNPLDTLLIVEGYIDAVTPYQHGIRKVIALGSASFTKEHLEFLEKENRINRIAFALDN DKIGNQRTEKIVEAIKGMKLRKNYSLAINKTKFKDLDEALNSGEINSVNEVYDIVSLFDY EIQKLKENKEISESAIFDKFVTIICQTDSPKEREEQARTLSKYLNEYSYKTILEEIDFKI NGKTERFRNEVIEITKKAFNNINKNPDYVEEIMDNIKEDIDNIKEKYDKKEGDIFERGML SFEKQEQEKANESLYKINFGIPWFDDLDLMPGNSIIVSGLANTGNYFAVCNEKYPSILQI IRTE

Coding DNA - Genome Coordinates: 1365714-1364080 | Orientation: Reverse

ORF FASTA file - Coding DNA

TTGCCTACAAGTATTGAAGAATTAATGCAATTGCTCAAAGAAAAAACATTACAATATGCAATGGAAATGG GCGTACAAATTAACGGAAGCGGTTTCGCAAGGTGTTTATCCGGAACACACGAAGATCGCAATCCAAGTAT GCATTACTGGGAAGAAAAAGGAATTTTTCATTGCTTTAGCTGCTCTTTTGTTGCAGATATATTTACATTA TGCAACAAATTGGAGCAAAAACCAATGAACGGACCAGACTTTATTGAAGATAATGTATTTTACCTAGCAA ACAAGTATGGAATTCCTTATGAACATTTGAGGAAAACGTTAACACCGGAAGAACATAAAAAACACATTCT TCTAAGAACTATGAAGACATTTGCAGAATACGTTGTTTCGCATGTTAGAGAAGACTATTTACAGCAAAGA AATATAACAAAAGAAACTGCCAAGAAGTTATGTATTGGTAGTGTTCCCAATTATCAAGAATTGGAAAATT ACATGTTATCTCAACAATGCGATTTAAATGTTATGAAAGAGATCGGAATCAAACAAGGTTTTATCAATGA AAATAAACTTATTTTCATTATAAAAGATCATTGGAATAGACCTGTTAGCTTTGTATCCAGAAATATGAAT CCCAATGTAAACGGACCAAAATATATTAACGGTTTAGAAACATCGATCTATGAAAAAAGAAAAATTTTTT TCAACTGGAACAATATCAAAAGAGAATTTAATCCTTTAGATACTTTATTGATCGTTGAAGGATACATAGA TGCTGTTACACCTTATCAACATGGTATTAGAAAAGTAATAGCACTAGGTTCTGCTTCCTTTACGAAAGAG CATTTAGAATTTTTAGAAAAAGAAAACAGAATAAATAGAATTGCTTTTGCTTTAGACAATGACAAAATAG GAAATCAAAGAACAGAAAAAATAGTAGAAGCAATCAAAGGGATGAAACTTCGAAAAAACTATTCTCTTGC AATTAATAAAACAAAATTTAAAGATTTAGACGAAGCTTTAAATAGCGGGGAAATAAATAGTGTTAACGAA GTTTACGATATTGTTAGTTTGTTTGATTATGAAATTCAAAAATTAAAAGAAAATAAAGAAATTTCAGAAT CAGCCATTTTTGACAAATTTGTCACTATTATTTGTCAAACGGACTCTCCGAAAGAAAGAGAAGAACAGGC AAGAACATTATCGAAATATTTAAATGAATATTCTTATAAAACAATTCTGGAAGAGATTGATTTTAAAATC AACGGTAAAACAGAACGTTTTAGAAATGAAGTTATCGAAATTACTAAAAAAGCATTTAATAATATCAATA AAAATCCAGATTATGTTGAAGAAATCATGGATAACATCAAAGAAGATATCGATAATATAAAAGAAAAATA TGACAAAAAAGAAGGAGATATTTTCGAAAGAGGAATGCTCTCTTTTGAAAAACAAGAACAAGAAAAAGCA AATGAATCTTTATATAAGATTAATTTTGGAATTCCGTGGTTCGATGATTTAGATTTGATGCCAGGAAACT CCATAATTGTTAGTGGACTAGCAAATACAGGTAATTACTTTGCCGTCTGTAATGAAAAGTACCCAAGTAT ATTACAGATTATTAGAACTGAATAA

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