F. necrophorum 1_1_36S_FusoPortal_Gene_1478

InterPro predicted function: Outer membrane efflux protein
InterPro Accessions: IPR003423

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1478.out

Amino Acids: 424

ORF FASTA file - Amino Acids

MMKKIAAIFFLTGTVLFAGEITLEEAIARALKHSREVQIAEKKFLSSKIKSKQAIKKALP SLVYSGSYQQSEYERMQAKNRTEKQGEKIGYRQSVTLTQPLFQGGSIVAEIQGAKYYESL FEIEYLQKKIETRLKTIQIYSHIVRAKKELEALRYSKKQLEQRYEKQKVQLELQLITRTD LLKTEYHLLSVESQMEKAKNEIEVQTENLKIQMGLFKDEEIEIQEFFVPKQCSAKINFEK DREQAMETSMSVLSAKYRLEIAKAEQRGRAGEMLPEINLFASYENVGERRTFNQSRKDME WIGGVEVRWKLFSFGREYDSYKVATLEKEAQEFSQKEVEDSLRLKLRKAYLDLCRLEILR DSKTKALETAELNFQMEQEKYDAGLISVVDYLDSEKQLREAKVSYYQTELEYYYAFEYYQ SLLV

Coding DNA - Genome Coordinates: 1521037-1522311 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGATGAAAAAAATAGCAGCCATATTTTTTTTAACAGGGACTGTCCTGTTTGCCGGAGAGATCACTCTGG AGGAAGCGATTGCGAGAGCCTTGAAGCACAGTAGAGAAGTGCAAATTGCTGAAAAAAAATTCCTCTCCTC CAAAATCAAATCAAAGCAAGCCATAAAAAAAGCTCTGCCAAGCCTCGTATATTCAGGAAGCTATCAGCAA AGTGAATATGAAAGAATGCAGGCAAAAAACAGAACGGAAAAGCAAGGAGAAAAGATAGGCTATCGTCAAT CCGTTACTCTTACACAGCCTCTCTTTCAAGGAGGGAGTATTGTTGCCGAAATACAAGGAGCAAAGTATTA TGAAAGTCTTTTTGAAATAGAGTATCTACAGAAAAAAATAGAAACAAGATTAAAAACCATTCAAATCTAC TCTCATATCGTAAGAGCCAAGAAGGAATTGGAAGCCTTGAGATATTCAAAAAAACAATTGGAGCAACGAT ATGAAAAACAGAAAGTACAACTTGAGCTGCAACTGATTACAAGAACAGATTTATTGAAAACGGAATATCA TCTATTATCGGTAGAATCTCAGATGGAGAAGGCGAAAAATGAGATAGAAGTGCAAACGGAAAACTTAAAA ATTCAAATGGGACTTTTCAAGGATGAGGAAATAGAAATTCAAGAATTTTTTGTTCCCAAGCAATGCAGTG CCAAGATTAATTTTGAAAAGGATAGGGAGCAGGCAATGGAAACAAGTATGTCGGTATTGTCGGCAAAATA TCGACTGGAAATTGCAAAAGCGGAGCAAAGGGGAAGAGCGGGAGAAATGTTGCCTGAAATCAATCTCTTT GCAAGTTATGAAAATGTGGGAGAAAGAAGAACTTTTAATCAAAGTAGGAAAGACATGGAATGGATTGGCG GTGTGGAAGTTCGTTGGAAGCTTTTCTCTTTTGGAAGGGAATATGATAGCTACAAAGTTGCGACTTTGGA AAAGGAGGCACAAGAATTTTCCCAAAAAGAAGTAGAAGACTCTCTTCGCTTGAAACTTCGAAAGGCTTAT TTGGACTTATGTCGTTTGGAAATCTTGCGAGACTCCAAAACGAAAGCTTTGGAAACGGCAGAATTGAATT TTCAAATGGAACAGGAAAAGTATGATGCCGGTCTGATTTCCGTAGTAGATTATTTGGATTCCGAAAAACA GCTGCGAGAAGCTAAAGTCAGCTATTATCAAACAGAATTGGAGTATTATTATGCATTTGAATATTATCAA TCATTGTTAGTATAG

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