F. necrophorum 1_1_36S_FusoPortal_Gene_1488

InterPro predicted function: "DNA binding HTH domain
InterPro Accessions: IPR018060

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1488.out

Amino Acids: 324

ORF FASTA file - Amino Acids

MKPYYEFVQTYLGATDCKNDQKYCSVGHTFYFNKEEIEGIYWFYETKDFIVDIHDFFIKK DFTQNNFPNMSYFMSLCSSYLITANGESFNPYQTLSSNLLYIMDIDNLDTNYHFLLHGNY PYLSVGINFKKQMIEEYLNSLKNKGNINYSDIFFNTKSIVSKSLESLAKDILNCKMSSPA AEIFFEAKAKEWLSITIDAFLSRKNIHLSLDDDKALENVANYLDDHYAITVSQKVLEKIA MMSGTKLKKLFKQKYQMSITEYSQRRRMNIAEILLLNSNLKIKEIAEAVGYSSHSKFSTC YKKYKGVYPREIKKFNLNLRSKNI

Coding DNA - Genome Coordinates: 1535594-1536568 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGAAGCCCTACTATGAATTTGTTCAAACATATTTAGGAGCGACTGATTGTAAAAATGATCAGAAATATT GCAGTGTAGGTCATACTTTCTATTTTAATAAGGAGGAGATTGAGGGGATTTATTGGTTTTATGAGACGAA AGATTTCATTGTGGATATTCATGATTTCTTTATAAAAAAAGATTTTACTCAAAACAACTTTCCAAACATG AGTTATTTTATGTCTTTATGTTCTTCCTATTTAATCACGGCAAACGGCGAAAGTTTCAATCCTTATCAAA CACTGTCTTCCAATCTTCTATATATTATGGATATCGATAATTTAGATACCAATTATCACTTTTTATTGCA TGGGAATTATCCTTATTTAAGTGTCGGAATCAATTTTAAAAAGCAAATGATTGAAGAATATCTCAACTCT TTAAAAAATAAAGGGAATATCAATTACTCCGATATATTTTTCAATACAAAATCGATTGTGAGTAAATCCT TGGAATCTTTAGCAAAAGATATACTTAACTGTAAAATGAGTTCTCCTGCTGCGGAAATCTTTTTTGAAGC AAAAGCGAAAGAGTGGTTAAGCATCACGATAGATGCCTTTTTAAGCAGAAAAAATATTCATCTTTCATTA GATGATGATAAGGCACTTGAAAATGTTGCAAATTATCTTGACGATCATTATGCCATAACTGTTTCACAAA AAGTTCTTGAAAAAATTGCGATGATGAGTGGGACTAAATTAAAAAAGTTATTTAAACAAAAATATCAAAT GAGTATTACGGAATATTCACAAAGAAGACGAATGAATATTGCTGAAATTTTACTTTTAAATTCGAACCTT AAAATTAAAGAGATTGCTGAAGCGGTAGGTTATTCTTCCCACTCCAAATTTTCGACATGTTATAAAAAAT ACAAAGGTGTTTATCCCCGTGAAATCAAAAAATTTAATTTAAATTTAAGGTCTAAAAATATATAA

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