F. necrophorum 1_1_36S_FusoPortal_Gene_1500

InterPro predicted function: "Pertactin
InterPro Accessions: IPR004899;IPR005546

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1500.out

Amino Acids: 760

ORF FASTA file - Amino Acids

MFGDEFHPSPEAHRIISDYMISMLESEDGKVKDESIKNMEARSSEQVPLAKTNISSVEES HETPNEKYIRGYVPYGALQVKNGAKLRWKDLHLENDGIAFSVEGQGSSMTVENYHVENTA RINAVAQVENGGNLILKNGSLRTKRGSKITYPFGLRVNGKDSKAELITSTLEIQGSQVVG ISAGNQGRVELLSSRILARGNNAKGIHAWNATLRFKNSEIISDGVGAWIFSNDTKNNKTS FVMEENSNIYGKEYAMKISPNVTGNRVFADISLRKSRVDGGIFTDVKSESNIHIKDSYWK MSKNSSVTELNLEDSTLHFSPENTEEFHELTIRNNYTGKNALLKMKGKLSDDKSPTDKLI VLGKAKGNTWIDYQNQGGSGAKTQYGIKIIDLSQKEEENIFRLLRPVYVGNYEYTLLEGG NNAQEREDYYLTSTLVSQGGKLYIPLNHKRFALAMPQSLNSSFFVLPSALMDPGAFAPRK EEESKIIQLYRPRTVMRAFLPYLNMENNYQSIFHIRDRNRVYVSRESSTTKWNDEYIKAK TKSGITKVSYPLYKSFGAFFSYDENTTEVENKTRKYFQKATNIGSIKQRNIHAGFYYQHR LFDFLDVDHTLQYAWIRNTLHTEEKKEKIYGHGIAYSSEIAVPISLGTNLSLIPHYQIDY FRQKIEDFHDYGIRNYAGGKISWSKKPFSLETGLDYQWDLRRISGRTIGEDYFSHHDNKN TLLYQVAMEYELFPDLKINGKMKIKGKEQKFYEVGTSYKF

Coding DNA - Genome Coordinates: 1547540-1545258 | Orientation: Reverse

ORF FASTA file - Coding DNA

GTGTTCGGAGATGAATTTCATCCTTCCCCGGAAGCACATCGAATTATTTCGGATTACATGATTAGTATGC TGGAAAGTGAGGATGGAAAGGTTAAAGATGAGAGCATAAAAAATATGGAAGCCCGCTCTTCGGAACAAGT TCCTCTTGCAAAGACAAATATATCTTCTGTAGAAGAATCCCATGAAACGCCGAATGAAAAATATATTAGA GGATATGTTCCTTATGGAGCCTTGCAAGTAAAAAATGGTGCAAAACTTCGTTGGAAGGATCTTCACTTGG AAAATGACGGAATTGCCTTTTCGGTTGAGGGACAAGGGAGCTCCATGACTGTGGAAAATTATCACGTAGA AAATACCGCTAGAATCAATGCGGTTGCTCAAGTGGAAAATGGTGGAAATCTTATTCTAAAGAACGGAAGC TTACGAACAAAAAGAGGGAGCAAAATTACCTATCCATTTGGATTACGTGTAAATGGAAAAGACTCTAAGG CTGAGTTGATAACTTCCACTTTGGAAATTCAAGGAAGTCAGGTTGTCGGAATTTCTGCTGGAAACCAAGG AAGAGTAGAACTGTTGTCTTCTCGAATTCTCGCAAGAGGAAACAATGCAAAGGGGATACACGCTTGGAAT GCAACTCTTCGTTTCAAGAATTCTGAAATTATTTCTGACGGAGTGGGAGCTTGGATTTTTTCCAATGATA CTAAAAATAACAAAACAAGTTTTGTCATGGAAGAAAATAGTAACATTTACGGAAAAGAATATGCTATGAA AATTTCTCCTAATGTTACAGGCAATAGAGTTTTTGCCGATATTTCCTTAAGAAAATCGAGAGTGGATGGA GGAATTTTTACAGATGTAAAAAGCGAATCTAATATCCATATCAAAGATTCCTATTGGAAGATGTCAAAGA ATTCTTCTGTAACAGAGTTAAACTTAGAAGATTCCACTTTACATTTTTCGCCTGAAAATACGGAAGAATT TCATGAATTGACGATTCGAAATAACTATACCGGAAAAAACGCTTTACTAAAAATGAAGGGAAAACTTTCC GATGATAAGTCTCCTACGGATAAACTTATCGTTCTTGGAAAAGCAAAAGGAAATACTTGGATTGATTATC AAAATCAAGGAGGAAGCGGAGCCAAGACACAATATGGAATTAAAATCATTGATCTGTCTCAAAAAGAGGA AGAAAATATATTTCGATTACTAAGACCTGTTTATGTTGGAAATTACGAATATACTCTACTGGAAGGAGGA AATAATGCTCAAGAAAGAGAAGACTACTACTTAACTTCGACCTTAGTTTCTCAAGGCGGAAAGTTATATA TTCCACTAAACCATAAAAGATTCGCTCTTGCTATGCCACAATCATTGAACAGCAGCTTCTTCGTTCTTCC CTCCGCTCTCATGGATCCTGGAGCATTTGCTCCAAGGAAAGAAGAAGAGTCAAAAATCATTCAATTATAT CGTCCTAGGACAGTAATGAGAGCCTTTCTTCCTTATTTAAATATGGAAAACAATTACCAAAGTATTTTTC ATATACGAGACAGAAATCGAGTTTATGTTTCAAGAGAAAGTTCCACTACAAAATGGAATGATGAATATAT TAAAGCAAAAACAAAATCCGGCATTACCAAAGTCTCTTATCCGCTTTATAAAAGTTTCGGAGCTTTTTTC TCCTATGATGAAAATACTACAGAAGTGGAAAACAAGACGAGAAAATATTTTCAAAAAGCAACCAATATTG GAAGTATCAAACAAAGAAACATTCATGCAGGTTTTTATTATCAACACCGTCTTTTCGATTTTTTAGATGT AGATCATACCTTACAATATGCATGGATTCGAAATACTTTACATACGGAAGAGAAAAAAGAAAAGATATAT GGACACGGAATTGCTTATTCTTCTGAAATTGCGGTACCGATTTCTTTGGGAACAAATTTATCCTTAATTC CACATTATCAAATTGATTATTTTCGACAAAAAATAGAAGATTTTCATGATTATGGAATTCGAAATTATGC CGGTGGAAAAATCTCTTGGAGTAAAAAACCTTTCTCTCTGGAAACAGGACTTGACTATCAATGGGATTTA AGAAGAATTTCCGGAAGGACTATAGGGGAAGATTATTTTTCTCACCATGACAATAAAAATACTTTGCTAT ATCAAGTAGCTATGGAATATGAATTATTTCCGGATTTAAAAATCAATGGAAAAATGAAGATAAAAGGGAA AGAACAAAAATTTTATGAAGTGGGAACCAGCTATAAATTCTAA

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