F. necrophorum 1_1_36S_FusoPortal_Gene_1503

InterPro predicted function: "RND efflux pump
InterPro Accessions: noIPR

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1503.out

Amino Acids: 417

ORF FASTA file - Amino Acids

MNYMKNVDPDVYNAIMAEKKRQEEGIELIASENFVSKAVMEAAGSVLTNKYAEGYPKKRY YGGCVNIDIVENLAIERLKEIFGAKYANVQAHSGSQANMGVYVALLEPGDKILGMSLSAG GHLTHGYKISFSGKNYIGLEYGLNSETELIDFDAIRKIALAERPKIIVAGASAYSRIINF QKFREIADEVGAYLMVDMAHIAGLVAAGEHPNPLEYAHVVTSTTHKTLRGPRGGVILTNH QEIAEKIDKTIFPGIQGGPLGHIVAAKAVAFKEALTPEFKDYQRQVVKNAKTMAEELVSG GLRIVSGGTDNHLMLVDLRSKGVTGKVAEKILEEAGITCNKNAIPNDPEKPFITSGIRLG TPAITTRGMKEEEARQIAKMIIKVLNNPEDSQKIAEVKEEVLALTKKFPLFSDEETE

Coding DNA - Genome Coordinates: 1550272-1551525 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGAACTATATGAAAAATGTTGACCCGGATGTTTATAATGCCATTATGGCAGAAAAGAAAAGACAAGAAG AAGGAATTGAATTGATTGCTTCTGAAAATTTTGTTTCAAAGGCAGTCATGGAAGCGGCAGGATCCGTCCT TACCAATAAGTATGCAGAGGGTTATCCCAAAAAAAGATATTATGGTGGTTGTGTAAACATCGATATTGTT GAAAATTTAGCAATTGAAAGATTGAAAGAAATATTTGGAGCTAAATATGCGAATGTCCAAGCACATTCCG GTTCTCAAGCAAATATGGGAGTTTATGTTGCTTTGTTAGAACCCGGAGATAAAATTTTAGGAATGAGTTT AAGTGCCGGAGGGCATTTGACTCATGGTTATAAAATAAGTTTTTCCGGAAAAAATTATATAGGATTGGAA TATGGATTAAATTCGGAAACGGAATTGATAGATTTTGATGCCATTCGAAAAATAGCTTTGGCAGAAAGAC CAAAAATTATTGTTGCCGGAGCAAGTGCTTATTCCAGAATTATTAACTTCCAAAAATTCAGAGAAATTGC AGACGAGGTAGGAGCTTATCTTATGGTAGATATGGCACATATTGCAGGACTTGTTGCTGCCGGAGAACAT CCTAATCCTTTGGAATATGCACATGTCGTCACTTCGACAACTCATAAAACTTTGAGAGGTCCTCGTGGTG GAGTGATCTTAACCAATCATCAAGAAATTGCAGAAAAAATTGATAAGACTATTTTTCCCGGAATTCAAGG AGGACCTTTAGGACATATTGTTGCTGCAAAAGCTGTAGCCTTCAAAGAAGCATTGACTCCTGAATTTAAA GACTATCAAAGGCAAGTTGTAAAAAATGCAAAAACTATGGCGGAAGAACTGGTATCCGGAGGATTAAGAA TTGTCAGTGGAGGAACGGATAATCATTTGATGCTGGTAGACTTGAGGTCCAAAGGAGTTACGGGAAAAGT TGCAGAAAAAATTTTGGAAGAAGCAGGAATTACCTGCAATAAAAATGCCATTCCGAACGATCCTGAAAAA CCCTTTATCACAAGCGGAATTCGTTTGGGAACACCGGCGATTACCACCAGAGGGATGAAGGAAGAGGAAG CCCGACAAATTGCCAAAATGATAATAAAGGTTTTAAACAATCCGGAGGATAGCCAAAAAATAGCGGAAGT AAAGGAAGAAGTGTTAGCCTTGACTAAAAAATTTCCTCTATTTTCAGATGAAGAAACGGAATAG

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