F. necrophorum 1_1_36S_FusoPortal_Gene_167

InterPro predicted function: "RNA polymerase sigma-70 region 2;RNA polymerase sigma-70 region 4;RNA polymerase sigma factor 70
InterPro Accessions: IPR007627;IPR007630;IPR007127;IPR007624;IPR009042

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_167.out

Amino Acids: 436

ORF FASTA file - Amino Acids

MREFIKNEKVLSLIRKAMKEKVITYEEINDELKEDFPLEQIDKLISGMIEQGIEIKKKAS LEKEKKEKTKKKTVKAPSKETSKITTPKKRKKRDEVEEFSRLKEEEEDFQDTDLSFEELP EDENLEDLLDKEEDFDASDLEELPEEELSNEELAELSNGMKVDEPIKMYLREIGQIPLLT HKEELELAKKALEGDEFANKRLIEANLRLVVSIAKKHTNRGLKLLDLIQEGNIGLMKAVE KFEYTKGYKFSTYATWWIRQAITRAIADQGRTIRIPVHMIETINKIKKEARIYLQETGKD ATPEILAERLGMEVEKVKSIQEMNQDPISLETPVGSEEDSELGDFVEDQKMLTPYELTNR SLLREQLDSVLGSLSSREEKVLRYRYGLDDGSPKTLEEVGKIFKVTRERIRQIEVKALRK LRHPSRRKKLEDFKVE

Coding DNA - Genome Coordinates: 175342-174032 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGAGGGAGTTTATAAAAAACGAAAAGGTTCTTTCCCTAATTCGAAAAGCAATGAAAGAGAAAGTAATCA CATATGAAGAAATTAACGATGAACTCAAAGAAGATTTTCCTTTGGAACAAATTGATAAATTGATCAGCGG TATGATAGAACAAGGAATTGAAATCAAGAAAAAAGCTTCCTTAGAAAAAGAAAAAAAAGAAAAAACAAAG AAAAAAACTGTGAAGGCACCTTCCAAGGAGACTTCTAAAATAACAACTCCAAAGAAACGTAAAAAAAGAG ACGAAGTAGAGGAATTTTCTAGATTAAAAGAAGAGGAAGAGGATTTTCAGGATACGGATTTGTCCTTTGA AGAACTTCCGGAAGATGAAAATTTGGAAGATTTACTGGATAAAGAAGAAGATTTTGATGCGAGCGATTTG GAAGAACTTCCGGAAGAAGAGCTAAGCAATGAAGAATTGGCAGAATTGTCCAATGGAATGAAAGTAGATG AGCCTATCAAGATGTATCTACGAGAAATTGGACAAATTCCTTTGTTAACTCATAAGGAAGAACTAGAGTT GGCTAAAAAAGCTTTAGAGGGGGATGAGTTCGCCAATAAGCGTTTGATTGAGGCAAACTTGAGACTTGTA GTCAGTATTGCGAAAAAGCATACCAATCGAGGATTGAAGTTATTGGATTTAATTCAAGAAGGAAATATTG GATTGATGAAAGCAGTAGAAAAATTTGAATATACCAAAGGATATAAATTTTCTACCTATGCGACTTGGTG GATTCGTCAAGCCATCACAAGAGCCATTGCCGATCAAGGAAGAACCATTCGTATTCCGGTTCATATGATA GAAACTATCAACAAAATAAAAAAAGAGGCCAGAATTTATCTGCAAGAGACAGGGAAAGATGCAACTCCTG AAATTTTAGCAGAAAGATTGGGAATGGAAGTGGAAAAAGTAAAATCGATTCAAGAGATGAACCAAGATCC TATTTCTTTGGAAACTCCTGTGGGAAGTGAAGAAGATAGTGAGTTGGGAGATTTTGTGGAAGATCAGAAA ATGTTGACACCCTATGAGTTGACAAACCGTTCTTTATTGCGGGAACAATTGGATAGTGTGTTAGGAAGTT TAAGCAGTCGAGAGGAAAAAGTTCTTCGATACCGTTATGGACTGGATGACGGGTCTCCAAAGACTTTAGA GGAAGTCGGAAAGATTTTTAAAGTAACAAGAGAGAGGATTCGTCAAATTGAGGTAAAAGCCCTACGAAAA TTAAGACATCCGAGTAGAAGAAAAAAATTAGAAGATTTTAAAGTGGAATAA

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