F. necrophorum 1_1_36S_FusoPortal_Gene_1696

InterPro predicted function: RNA polymerase sigma-70 region 4;RNA polymerase sigma-70 region 3;RNA polymerase sigma-70 region 1.2;RNA polymerase sigma-70 region 2
InterPro Accessions: IPR007630;IPR007624;IPR009042;IPR007627

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1696.out

Amino Acids: 272

ORF FASTA file - Amino Acids

MAERDLLSLYLKDIRQYKTLEKEEELELVIKAQSGDEEAKNQLILCNLRLVVNVAKGYRS KGMNLIDLISEGNLGLIRAIEKFDVEKGFRFSTYAVWWIKQSISKAIIFKGREIRIPSYR YDILNKINRYVTEEIKLCGVYPSVEEVAEYLNMPVNKVEEIMIEFQEPMSLSTEIGEDIY LEDTLSGTEEHFEEKVYYKMMQQRLKDILNRLDTREQEILKLRFGLDGYEIHTLEEIGKN FNITRERVRQIEKNTLKKLKRKYTKELRETLL

Coding DNA - Genome Coordinates: 1772294-1771476 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGGCAGAGCGGGATTTACTCTCATTATATTTAAAAGATATTAGACAGTACAAAACCTTAGAGAAGGAAG AAGAGTTGGAATTGGTGATCAAAGCTCAATCCGGCGATGAAGAAGCAAAAAACCAGTTAATCTTATGTAA TTTACGTCTTGTTGTGAATGTTGCAAAAGGTTATCGTAGTAAGGGAATGAATTTAATCGATTTGATTAGT GAAGGAAATCTGGGCTTGATTCGTGCCATTGAAAAATTTGATGTAGAGAAAGGATTTCGTTTTTCTACCT ATGCAGTTTGGTGGATTAAGCAGTCCATTAGTAAAGCTATTATTTTCAAAGGAAGAGAAATCAGAATTCC TTCCTATCGTTACGATATTTTAAATAAAATTAACAGATATGTAACGGAAGAAATAAAATTATGTGGAGTA TATCCGAGCGTGGAAGAAGTTGCGGAATATTTAAATATGCCGGTAAATAAAGTAGAAGAAATCATGATCG AGTTTCAGGAACCTATGTCTTTGAGTACCGAAATAGGAGAGGATATTTATTTGGAAGATACCTTGAGTGG AACAGAAGAACATTTTGAAGAAAAGGTCTATTACAAAATGATGCAACAAAGACTAAAAGATATTTTAAAT CGTTTGGATACTCGAGAACAGGAAATTTTAAAGCTTCGTTTCGGTTTGGATGGATATGAAATTCATACTT TGGAAGAGATTGGAAAAAATTTCAATATCACCAGGGAACGAGTTCGACAAATAGAAAAAAATACTTTAAA AAAATTAAAGCGTAAATATACAAAAGAATTGAGGGAAACATTACTATAA

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