F. necrophorum 1_1_36S_FusoPortal_Gene_170

InterPro predicted function: "RNA polymerase sigma factor 54 interaction domain;Signal transduction response regulator
InterPro Accessions: IPR002078;IPR001789;IPR002197

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_170.out

Amino Acids: 461

ORF FASTA file - Amino Acids

MKNAILAISEKKETLKQIRKELSEKYEVITFNNLLDAIDMLRESDFDLVLLDEYLTWFSL SDAKKKLSSIGKDFATIALFDDITPEKQREIKQAGIYSYLPKPVLASDIDKVILPVLHNL ELLKENKKINGKLTELEHETEIIGQSSKIKEVKNLIDRVADSDLPVLISGEKGVGKLVIA REIYKKSDRKKQDYIQVSCATIPEENLERELFGYERGTFIGANTSKKGLLEEIDGGTIYI EDIALMDLKIQSKLLKVIEYGELRRVGGTKVRRVNVRFIIGSDIDLKEETEQGRFRKDLY HRLTAFPIVVPPLRERKEDVPLLVSYYLNRIVKELHRETPVISGEAMKYLMEYSYPRNIR ELKNMVERMALVSNEKILDVEDLPLEIKMKSATLENKTVVGVGPLKDILEQEIYSLDGVE KVVIASALQKTRWNKQETSKLLGIGRTTLYEKIRKYGLDIK

Coding DNA - Genome Coordinates: 180341-178956 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGAAAAATGCGATTTTGGCAATCTCTGAAAAGAAAGAAACCTTAAAGCAAATCCGAAAAGAATTATCGG AAAAGTATGAAGTGATAACATTTAATAATTTGTTAGATGCAATAGATATGTTACGGGAAAGTGATTTTGA TCTTGTGTTATTGGATGAATATTTGACATGGTTTAGTCTGTCCGATGCGAAAAAGAAATTGAGCAGTATT GGAAAGGACTTTGCGACCATTGCTCTGTTTGACGATATCACACCGGAGAAACAAAGAGAAATTAAGCAAG CAGGAATCTATTCTTATTTACCGAAACCGGTTTTGGCATCCGACATTGACAAGGTGATTTTACCGGTGCT GCATAATTTGGAATTGTTAAAAGAAAATAAGAAAATAAACGGAAAATTAACAGAATTGGAACATGAAACG GAAATTATCGGGCAATCTTCGAAAATTAAAGAAGTGAAAAATTTAATTGATAGAGTGGCAGACAGCGACT TGCCTGTTTTAATCAGTGGAGAAAAAGGGGTTGGAAAGTTAGTCATCGCTCGAGAAATTTATAAAAAGAG TGACAGAAAGAAACAAGACTATATTCAAGTAAGCTGTGCAACGATTCCGGAAGAAAACTTGGAAAGAGAG TTATTCGGATATGAAAGAGGAACATTCATCGGAGCTAATACAAGTAAAAAAGGCTTATTGGAAGAAATTG ACGGAGGAACTATTTACATTGAAGATATTGCTCTCATGGATTTAAAAATTCAATCGAAGCTTTTAAAAGT GATTGAATATGGAGAGTTACGAAGAGTTGGAGGAACGAAGGTTCGAAGAGTCAATGTAAGATTTATCATC GGAAGTGATATTGATTTAAAAGAAGAAACGGAACAAGGAAGATTCAGAAAAGACTTATATCATAGATTGA CAGCTTTTCCAATTGTCGTTCCACCGTTACGAGAACGAAAAGAAGATGTGCCATTGTTGGTAAGTTACTA TTTAAATCGAATTGTAAAAGAATTGCACCGAGAAACTCCTGTTATTTCCGGGGAAGCAATGAAGTATTTG ATGGAATATTCCTATCCGAGAAATATTCGAGAATTAAAAAATATGGTCGAAAGAATGGCTTTGGTATCGA ATGAAAAGATATTGGATGTCGAGGATTTACCATTGGAAATTAAGATGAAATCAGCTACTCTGGAAAATAA GACAGTGGTTGGAGTAGGGCCGCTAAAGGATATTTTGGAACAAGAAATTTACAGTTTGGATGGAGTAGAA AAAGTTGTGATTGCCTCTGCACTTCAAAAAACAAGATGGAATAAACAAGAAACTTCTAAGTTGTTAGGAA TCGGAAGAACTACTTTATACGAAAAGATTAGAAAATATGGATTGGACATCAAATAG

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