F. necrophorum 1_1_36S_FusoPortal_Gene_1712

InterPro predicted function: "Oligopeptide/dipeptide ABC transporter
InterPro Accessions: IPR013563;IPR003439

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1712.out

Amino Acids: 556

ORF FASTA file - Amino Acids

MEEILRVENLSVEYYAASGKRQTGIQNINFSLQEGEIYGIIGESGSGKSTLLLAILGLLE DKAEIKGKIFYRGKEIQNLSEKEKKKIRFEEIAVVFQNQLDRLNPSLTVEEQILEIIRKK FQKKEEQEKRLLELFQMLHLDVSLRKKYPHQLSGGMRQRVFIAMGLALKPKILLIDEPTT ALDPELKQQILELFQKIYKEYGMTMLIVSHDLEVIEKLSRKMFVFLRGSLLERGNTTDIL EEARHPYTAALLQSSPYLNEWKDLWGIVEEEERHSCPFYERCTQKVKECLQYIPNLKVEE EEGVACLKKGLETVLTAKNMSKNFQEGKKKIEAVKDCSLRIRHREIVVLLGKSGSGKTTL LGLLSGLLPKEEGELCYLGEVIEKNDLLSREHCIQIVEQDPFSSTNPFLSVEEVIAEPHR ILYKKNLAFFRETVIKYLKKVGLESGEEFLKKKMNELSGGQRQKVAIARAISMQPKLLLA DEITSMLDDSGKVNIMRLLKQLQYDIGFSMLFVTHDVILAKKIADYVYYMEKGEIVRKGS VRKVFCQTEERKYEYQ

Coding DNA - Genome Coordinates: 1787616-1785946 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGGAAGAAATATTAAGAGTGGAAAATTTATCCGTGGAATATTATGCTGCTTCCGGCAAAAGGCAGACAG GAATTCAAAATATTAATTTTTCTTTGCAAGAAGGAGAAATATATGGGATTATAGGAGAGTCAGGAAGTGG AAAAAGTACTCTTTTATTAGCTATTTTAGGTTTGTTGGAGGATAAAGCGGAAATAAAGGGAAAAATTTTT TATCGAGGAAAAGAAATTCAAAATTTATCCGAAAAGGAAAAGAAAAAAATACGCTTTGAAGAAATTGCCG TGGTTTTTCAAAATCAACTGGATAGATTGAATCCCTCTTTGACAGTAGAGGAACAAATACTGGAAATCAT TCGAAAAAAATTTCAAAAAAAAGAGGAGCAGGAGAAGCGATTACTGGAATTGTTTCAAATGCTTCACTTA GATGTTTCTCTTAGAAAAAAATATCCCCATCAATTATCCGGAGGAATGAGACAGAGAGTTTTTATTGCCA TGGGTTTAGCCTTAAAGCCAAAGATACTTCTCATTGATGAACCTACCACGGCTTTGGATCCGGAACTAAA ACAGCAGATATTGGAACTGTTTCAAAAAATTTATAAGGAATATGGAATGACGATGTTGATCGTTTCTCAT GATTTGGAAGTCATAGAGAAATTATCCCGAAAGATGTTTGTCTTTCTTCGGGGTTCCCTCTTAGAGAGAG GAAATACGACAGATATTTTGGAAGAGGCAAGACATCCTTATACGGCAGCTCTTTTGCAGTCCAGTCCCTA CCTAAATGAGTGGAAGGATTTGTGGGGAATTGTGGAAGAAGAAGAAAGACATTCCTGTCCTTTTTATGAA AGATGTACACAAAAAGTGAAAGAGTGTTTGCAATATATTCCGAATTTAAAAGTGGAAGAAGAAGAGGGAG TTGCTTGCTTGAAAAAAGGATTGGAAACGGTACTGACGGCAAAAAATATGTCAAAAAATTTTCAAGAAGG GAAGAAGAAAATAGAAGCCGTCAAAGATTGCTCACTTCGAATACGACATCGAGAAATTGTTGTCTTATTG GGAAAATCCGGTTCGGGAAAGACGACTCTTTTGGGACTTCTTTCGGGATTGCTCCCGAAAGAGGAGGGAG AGTTGTGTTATTTGGGAGAAGTCATAGAGAAAAACGATTTGCTTTCTCGGGAACATTGCATACAGATAGT GGAGCAGGATCCTTTTTCCTCCACCAACCCTTTTTTAAGTGTGGAAGAGGTTATCGCAGAACCGCACAGG ATTTTGTATAAGAAAAATTTAGCATTTTTTCGAGAAACTGTGATAAAATATTTGAAAAAAGTGGGTTTGG AAAGCGGAGAAGAGTTTTTAAAAAAGAAAATGAATGAATTGTCAGGAGGACAGAGGCAGAAAGTGGCGAT TGCAAGAGCCATTTCCATGCAACCTAAATTACTATTGGCAGATGAAATCACTTCCATGTTGGACGATTCC GGTAAGGTCAATATTATGCGATTGTTGAAACAATTGCAATATGATATAGGATTTTCGATGCTTTTTGTTA CTCATGATGTCATTCTTGCGAAAAAAATCGCAGATTATGTGTATTATATGGAGAAAGGGGAAATTGTAAG AAAAGGGAGTGTGAGAAAAGTCTTCTGTCAAACAGAGGAAAGGAAATATGAATATCAATGA

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