F. necrophorum 1_1_36S_FusoPortal_Gene_1774

InterPro predicted function: "DNA-binding HTH domain
InterPro Accessions: IPR001647

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1774.out

Amino Acids: 374

ORF FASTA file - Amino Acids

MKKGKKKKIIDSAIQLFSQKNYEAVSIVEICRNAEVSNGIFYTYFKDKTDLFCFLLQETS VRINAYFQNIEGNSIFERLTSFIKINLSLTKEEFPLIKVYREGQYKFLEYEKNLKLVYHE ALEKVYQRPLDKYEHFFLMSGIRYINIFYTTKELTVDVPFLAKTLLYGLSEPLKLNISEL DDSSFYLRVPFNSSNIRCTFLNSGLEILKTTSFSSFRIQDLVEKVNLSTGTFYNYFRDKE DFLKIILFRIRKQVFYFLKDNYRQEQTTLDNYLTFLYLLFEYYKDSPFKYSLIRELELIY PKVYSQFVEEDIHFYIKNLLGDLFLNFQKKQLIAVLLLGYSHYMGIDFFYTGNFTKRDLF LKNLLFYLQNGIEE

Coding DNA - Genome Coordinates: 1864406-1865530 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGAAAAAAGGGAAAAAAAAGAAAATAATAGACTCCGCAATTCAGCTTTTCAGTCAAAAAAATTACGAAG CTGTATCTATTGTCGAGATTTGTAGAAATGCCGAAGTATCTAACGGTATTTTTTATACTTATTTTAAGGA TAAAACGGATTTGTTTTGCTTTTTACTTCAAGAAACTTCGGTTAGAATCAATGCATATTTTCAGAATATA GAGGGAAATAGTATCTTCGAAAGATTAACGTCTTTCATCAAAATCAATTTATCGTTAACAAAGGAAGAAT TTCCTTTAATTAAAGTTTATCGAGAAGGACAATATAAGTTTTTAGAATATGAAAAAAATTTAAAGCTCGT TTATCATGAAGCATTGGAGAAAGTTTATCAAAGACCTTTGGATAAATATGAGCATTTTTTTTTGATGTCC GGAATTCGATATATCAATATTTTCTATACTACAAAAGAACTGACTGTCGATGTCCCTTTTTTGGCTAAAA CATTATTGTACGGTCTGTCAGAACCGCTTAAACTGAATATTTCCGAGTTGGACGATTCTTCTTTTTATCT AAGAGTTCCTTTTAACAGCTCCAATATTCGATGTACTTTCTTGAATTCCGGATTGGAAATCTTAAAAACG ACATCGTTCTCTTCTTTCAGAATTCAGGACCTTGTAGAAAAAGTGAATTTGTCTACCGGAACTTTCTATA ACTATTTCAGAGATAAAGAGGATTTTTTAAAAATTATTTTATTCCGTATAAGAAAGCAAGTTTTTTACTT TTTAAAAGATAACTATCGTCAGGAACAAACTACCTTGGATAATTATCTTACTTTTCTGTATCTATTGTTT GAATATTATAAGGACAGTCCTTTTAAATATAGCCTGATACGGGAGTTGGAACTCATTTATCCTAAGGTGT ACAGTCAATTTGTAGAAGAGGATATCCATTTCTACATCAAAAACTTGCTCGGGGATCTATTTTTGAATTT TCAAAAAAAACAACTGATTGCGGTATTATTATTAGGGTATTCTCATTATATGGGAATTGATTTTTTTTAC ACAGGGAATTTCACTAAAAGAGATCTATTTTTGAAAAATTTATTATTCTATCTACAAAACGGAATTGAAG AATAA

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