F. necrophorum 1_1_36S_FusoPortal_Gene_1778

InterPro predicted function: Domain of unknown function DUF4143
InterPro Accessions: noIPR

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1778.out

Amino Acids: 378

ORF FASTA file - Amino Acids

MDKNECKKEIVLAICYDFDKTLSPDDMQAQGFIQSLGREVEEFWNDSNKLANDNEMDQNL AWMYKMTKESRGKHIFNRNMLTDYGSKITLYSGVETWFDRINQYGKEQGVEVEHYIISSG LKEMIEGTKVAKYFKKIYASSFYYDDCGLAVWPAQCVNYTNKTQFLFRIKKGTLNINDSK VNDYLEDEACRVPFRNMVYIGDSDTDVPCMKLVNINGGYSIGVYSGESKNKVFKMIAESR IKYFAKADYTEDSELEKLIKYIIDRTVVNEILEMKTVNCINEMKSERQGMEKEEIIREDL IDKLNESSSFSSTHEIIRLMSAINGWSKTQMERILEIAIRNSQVRYILKDKDVEEFYSKI YPKVDSEYSKQVIKILKE

Coding DNA - Genome Coordinates: 1869284-1868148 | Orientation: Reverse

ORF FASTA file - Coding DNA

TTGGACAAAAATGAATGTAAAAAAGAAATTGTATTAGCTATTTGTTATGATTTTGACAAGACATTATCAC CGGATGATATGCAAGCTCAAGGATTTATACAGTCATTAGGTAGGGAAGTGGAAGAATTTTGGAATGATTC TAATAAATTAGCAAATGACAATGAAATGGATCAAAATTTGGCTTGGATGTATAAAATGACAAAAGAATCG AGGGGAAAGCATATTTTTAATAGAAATATGCTAACAGACTACGGTTCAAAAATAACTTTATATTCAGGTG TGGAAACATGGTTTGACAGGATAAATCAATATGGAAAAGAACAAGGAGTAGAAGTTGAGCATTATATTAT TTCTTCCGGTTTGAAAGAAATGATTGAAGGCACAAAAGTGGCAAAATATTTTAAAAAAATATATGCAAGT TCATTTTATTATGATGACTGTGGTTTAGCAGTGTGGCCAGCTCAATGTGTCAATTATACAAATAAAACTC AATTTCTATTTAGAATCAAAAAGGGAACATTGAATATAAATGATTCAAAAGTAAATGATTATTTAGAAGA TGAGGCGTGTAGGGTTCCTTTTAGGAATATGGTGTATATTGGAGATAGTGATACTGATGTTCCGTGTATG AAGCTTGTGAACATAAACGGAGGTTATTCTATTGGAGTATATAGTGGAGAATCTAAAAATAAAGTATTCA AGATGATAGCGGAGAGTAGAATTAAATATTTTGCAAAAGCCGATTATACAGAAGATTCTGAGTTGGAAAA ATTAATAAAATATATAATTGATAGAACCGTTGTTAATGAAATACTGGAAATGAAAACTGTCAATTGTATT AATGAAATGAAAAGTGAAAGACAAGGGATGGAGAAAGAGGAAATTATAAGGGAAGATTTAATAGATAAAT TAAATGAAAGTTCTTCATTTTCTAGCACACATGAAATAATAAGGTTAATGTCTGCAATAAATGGTTGGTC AAAAACTCAAATGGAAAGAATATTGGAGATTGCCATTAGGAATAGTCAAGTTAGATATATTTTGAAAGAT AAGGATGTCGAGGAATTTTATAGTAAAATTTATCCAAAGGTAGATAGTGAATACTCAAAGCAAGTAATAA AAATTTTAAAAGAATAG

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