F. necrophorum 1_1_36S_FusoPortal_Gene_1783

InterPro predicted function: RNA polymerase sigma-70 region 2;RNA polymerase sigma-70 region 4
InterPro Accessions: IPR007627;IPR007630

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1783.out

Amino Acids: 382

ORF FASTA file - Amino Acids

MEGDKSQEAYNYLIYLASSQGYVTFDEIMDCADKHSLPIQDFNWLCNAITSRGIIVYNEI PSSLVAADNDEYDDFAQSDYEAVYTRIIELSPSLEPFVNDVRNIIPPQRQEINQLKYQIV DGNDYARSRMIEMHLRIALKLALQRAEAFDMDIEDAIGYACIGLIMAVDKYEPDTSKAFS SYASLWILQNISREQSTRRHLIYYPVHQKENYFLMYPFLKKHGCVECPDLAKCERVRQMI VDKLECSDKDAEIIVTQITPDLSLERFIAPNDEECNLYQCQYEMIDGTWEHTAHDIIISE EDALQTVYDKILCEDVAKILKKLTPREEAIIKLRYGFDLPEQTLEQVGKMYNITRERVRQ IESKALKKLRKLEVSKKLKDYL

Coding DNA - Genome Coordinates: 1875551-1874403 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGGAAGGGGATAAAAGTCAAGAGGCATATAATTATTTAATTTATCTTGCAAGCAGCCAAGGATATGTTA CTTTTGACGAGATTATGGATTGTGCAGACAAACATTCCCTTCCTATCCAGGATTTTAATTGGCTTTGCAA TGCAATTACATCTCGAGGCATTATTGTTTACAACGAAATCCCATCATCTTTGGTAGCCGCTGATAATGAT GAATATGATGATTTTGCCCAAAGCGACTATGAAGCAGTATATACAAGAATAATTGAATTATCACCTTCAC TAGAACCCTTTGTGAATGATGTAAGAAACATAATTCCACCACAGCGACAAGAAATAAATCAGCTTAAATA TCAAATAGTGGATGGAAATGATTACGCTAGATCTCGTATGATTGAAATGCATTTACGCATTGCTTTAAAA CTTGCATTACAAAGAGCAGAAGCATTCGATATGGATATTGAGGATGCAATTGGCTATGCTTGTATAGGTT TAATTATGGCTGTAGATAAATATGAGCCAGATACCTCAAAAGCTTTTTCTTCATATGCTTCTTTGTGGAT TTTGCAGAATATATCAAGAGAACAAAGTACTCGTCGCCATCTGATCTATTATCCAGTTCATCAAAAAGAG AATTATTTTTTGATGTATCCTTTTTTGAAAAAACATGGATGTGTTGAGTGTCCTGACTTGGCAAAATGTG AAAGGGTTAGGCAAATGATAGTTGATAAGCTAGAATGTTCCGATAAAGATGCGGAGATTATTGTTACACA AATAACTCCAGATTTAAGCCTTGAAAGATTTATTGCTCCAAATGACGAGGAATGTAATCTTTACCAATGT CAGTATGAAATGATTGATGGGACATGGGAACATACAGCACATGATATAATAATTTCAGAAGAGGATGCTT TACAAACGGTTTACGACAAAATACTTTGCGAAGATGTTGCAAAAATATTGAAAAAACTTACTCCTCGTGA AGAGGCTATTATAAAATTACGTTATGGATTTGATTTACCAGAACAGACATTAGAACAAGTAGGAAAGATG TACAATATAACAAGGGAACGAGTTCGGCAAATAGAGTCTAAGGCACTTAAGAAACTGCGAAAATTAGAAG TATCTAAAAAGCTAAAAGATTATTTGTGA

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