F. necrophorum 1_1_36S_FusoPortal_Gene_1787

InterPro predicted function: "Helicase
InterPro Accessions: IPR001650;IPR025202;IPR006935

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1787.out

Amino Acids: 716

ORF FASTA file - Amino Acids

MSLKDLEIKNEYRSKITDVVSNFFVPVLGESCSYKRSVGFFSSSSLIEVSKGICSLAKRG GTIKLVTSPCLSDEDVEAIKNGYKEREEVIKNALIRELKEPNNELESARLALLADLIAIG TLDIKVAVIDNGIGIYHEKLGLMEDRYDNIVAFSGSMNESETAIRKNYEAIDVFCSWSDK DSDRVREKKQAFDAIWNGYESGIEVLEFPEVSDEIIKRYKRGTAPDFSIDEKELLKKTTH KICEVKIPDEIELREYQNEAIKKWKENGYKGIFDMATGTGKTLTALGAITEISKELKNKI GVVIVCPYQHLVEQWVEDILRFNISPIIGYSSSLQKDWKKRLEKAVRNQKLRDDKSFFCF ICTNATFTNTFVQEQIRKSKYPILLVVDEAHNFGAASYTRLLDDRFKYRLALSATLERHG DEEGTNILYGYFGEKCIEYTLERAISEGKLTPYKYYPVVVYLNENELSNYQQLSYEMSKC VIKDKRGGYKLNKRGEILALKRARIIAGATDKLKTLREEISPYVNDNNILVYCGATNVLD EQLDSSSDDASDIRQIEAVTNILGNELGMDVAQFTSNENIETRSAIKEQFQRGDRLQAIV AIKCLDEGVNIPGIRTAFILASTTNPKEYIQRRGRVLRKAPNKPYAVIYDFVTLPRPLDS VPSLTTEQAKRDLSLVKNEFLRIKEFGRLSQNSMDAYNLIWDIQETYNIDDGFEEG

Coding DNA - Genome Coordinates: 1880412-1878262 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGAGCTTAAAGGATTTAGAAATTAAAAATGAATATCGCTCAAAAATTACCGATGTAGTTTCAAATTTTT TTGTACCTGTTTTAGGCGAGTCTTGTTCTTACAAGCGTTCGGTTGGTTTTTTTTCCTCTTCGAGTCTTAT TGAAGTCTCAAAAGGTATATGTAGTTTGGCAAAAAGAGGTGGAACAATAAAATTGGTTACATCCCCTTGT TTATCAGATGAAGATGTAGAAGCAATTAAAAACGGATACAAGGAACGTGAAGAAGTAATCAAGAATGCAC TTATTCGAGAACTTAAAGAGCCAAATAATGAATTAGAATCTGCTAGATTGGCTTTGCTTGCAGATTTGAT TGCTATAGGAACTCTCGATATTAAAGTGGCAGTCATCGACAATGGTATTGGAATTTATCATGAAAAATTA GGACTTATGGAAGATCGGTATGATAATATAGTGGCTTTTAGTGGCTCTATGAATGAGTCCGAAACAGCAA TTCGTAAAAACTATGAGGCAATAGATGTATTTTGCAGTTGGAGTGATAAAGATAGCGATAGAGTTCGTGA AAAAAAACAAGCATTTGATGCTATATGGAATGGATATGAAAGTGGAATTGAAGTTCTTGAATTTCCAGAA GTTTCCGATGAAATTATCAAGAGATACAAGCGTGGTACAGCTCCAGATTTTTCTATAGACGAAAAGGAAC TATTAAAAAAAACTACACATAAGATTTGCGAAGTAAAGATACCTGATGAGATTGAACTTAGAGAATATCA AAATGAAGCCATAAAAAAATGGAAGGAAAATGGTTATAAAGGCATTTTTGATATGGCAACAGGAACAGGA AAAACGCTAACAGCTCTTGGTGCCATAACTGAGATTTCTAAGGAATTGAAAAATAAAATCGGTGTAGTCA TAGTATGTCCATATCAACATTTAGTTGAACAATGGGTAGAAGATATACTCAGATTTAATATATCTCCAAT TATTGGCTACAGCAGTTCTTTACAAAAAGATTGGAAGAAACGTCTTGAAAAAGCTGTGAGGAATCAAAAG TTAAGAGACGACAAAAGCTTTTTTTGCTTTATCTGTACGAATGCTACATTTACGAACACATTTGTACAGG AGCAAATAAGAAAATCAAAATATCCAATTTTATTAGTTGTAGATGAGGCACATAATTTTGGAGCTGCATC CTATACAAGATTGCTGGATGATCGATTTAAATATCGACTTGCGTTGTCTGCAACTCTTGAACGACACGGC GATGAAGAGGGAACAAATATTCTTTATGGCTACTTTGGTGAAAAATGTATTGAATATACACTTGAAAGGG CAATTTCTGAAGGCAAATTAACACCATATAAATATTATCCTGTTGTGGTTTATCTCAACGAAAATGAACT TAGCAATTATCAGCAACTCTCTTATGAAATGTCCAAATGTGTAATAAAGGATAAAAGAGGAGGCTATAAG CTCAATAAACGTGGAGAAATACTTGCTTTGAAAAGAGCGCGGATTATAGCAGGAGCCACTGATAAATTAA AAACTCTTAGAGAAGAAATAAGTCCTTATGTTAATGATAACAATATCCTTGTGTATTGTGGGGCTACAAA TGTATTAGATGAACAGCTAGATTCATCATCAGATGACGCAAGCGATATTCGTCAAATTGAAGCAGTCACG AATATTTTAGGTAATGAGTTAGGGATGGATGTCGCTCAGTTTACTTCTAATGAAAATATTGAAACTCGCT CTGCTATAAAAGAACAATTTCAGCGTGGTGATAGATTGCAAGCAATAGTAGCAATAAAATGCTTAGATGA AGGCGTTAATATTCCTGGCATTAGAACTGCCTTTATATTGGCAAGCACAACTAATCCTAAAGAGTATATA CAAAGGCGAGGGCGTGTTCTAAGAAAGGCACCAAATAAACCATATGCTGTTATTTATGATTTTGTTACCC TACCTAGACCGCTTGATTCGGTTCCTTCGCTTACAACAGAGCAAGCCAAAAGAGATCTTTCGCTAGTAAA GAATGAATTCTTAAGAATAAAAGAATTTGGAAGATTATCGCAGAACTCAATGGATGCCTATAACTTAATA TGGGACATACAAGAAACATATAATATTGATGATGGATTTGAGGAGGGATAA

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