F. necrophorum 1_1_36S_FusoPortal_Gene_1816

InterPro predicted function: LacI-type HTH domain;Periplasmic binding protein
InterPro Accessions: IPR000843;IPR025997

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1816.out

Amino Acids: 335

ORF FASTA file - Amino Acids

MMTQKKIAEMLGISRTTVARALQENSSIKEETRKKVLDLIQETKYEKNYLGSSLAGRKKI VHAFIVKSKNEFYTGEIQRGMQKIQQKYAKYRLEIEVHLHDIHQAQEQVAALENILSQEK QVDGILIVPLEKKKIYHVIKPHLKKIPVISLTMQLHSDIAHIGTDYHRQGRIVANILAHC LRKGESLVILDNGDDKLSTQDYLEGFCERISEEELDILGPYSCQGIQESVELLKKLSQEK KIRGVFSNRYAQDIMKELPDSWFVGKHIVVNGMSEEIEQLLLEKKIIATVTEEVYEEASF AGKLLFQTLYQNKKIPKIWSKTNSKIIYLENLEKK

Coding DNA - Genome Coordinates: 1913455-1912448 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGATGACCCAAAAAAAAATAGCGGAAATGTTGGGAATCAGTCGAACGACAGTTGCCAGAGCTTTACAAG AAAATTCTTCTATCAAAGAAGAGACACGCAAGAAAGTTTTGGATTTGATACAAGAAACCAAATATGAAAA GAATTATTTGGGAAGCTCCTTAGCAGGAAGAAAAAAGATAGTGCATGCCTTTATAGTAAAATCAAAAAAT GAATTCTACACCGGTGAAATTCAAAGAGGCATGCAAAAAATACAACAAAAATATGCAAAATATCGTTTGG AAATAGAAGTTCATCTTCACGATATTCATCAAGCTCAGGAACAAGTTGCAGCGTTAGAGAATATTCTATC TCAAGAAAAACAAGTTGATGGAATTTTAATTGTACCTTTGGAAAAAAAGAAAATTTATCATGTAATAAAA CCTCATTTAAAAAAAATCCCGGTGATTTCTTTAACAATGCAACTTCATTCCGATATAGCTCATATAGGAA CCGATTATCATAGACAGGGAAGAATTGTAGCCAATATTTTGGCTCACTGTTTAAGGAAAGGAGAGAGCTT GGTTATTTTAGACAATGGAGATGATAAATTATCCACCCAAGATTATTTGGAAGGATTTTGTGAAAGAATT TCGGAAGAGGAGTTGGATATTTTGGGACCCTATTCCTGTCAAGGAATTCAAGAAAGTGTAGAACTCTTAA AAAAATTATCTCAAGAAAAGAAAATTCGGGGAGTGTTCAGCAATCGATATGCACAGGATATTATGAAAGA ATTGCCGGATTCCTGGTTTGTAGGAAAGCATATTGTTGTGAACGGAATGAGCGAAGAAATTGAACAGTTG TTGTTAGAAAAAAAGATAATTGCAACGGTGACGGAAGAAGTTTATGAAGAGGCTTCCTTTGCCGGAAAAT TATTATTTCAAACTTTGTATCAAAATAAAAAAATTCCAAAAATATGGAGTAAAACAAACTCCAAAATAAT ATATTTAGAAAATTTAGAAAAAAAGTAG

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