F. necrophorum 1_1_36S_FusoPortal_Gene_1832

InterPro predicted function: "Helix-turn-helix
InterPro Accessions: IPR013196;IPR000644

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1832.out

Amino Acids: 195

ORF FASTA file - Amino Acids

MELTRRQEKILHLIKENSPISGEDIAQNLGLTRSALRTDFSILRKMSLISARQNYGYCYI GGENKHKVGQVMGEPKKMDSKSSVYETIVYMFENDIGSVFITDHKDILVGVVSRKDLLKA ALGNKDLEKLPIHMVMTRMPNLIYVTEEDSIKTAVEKIMKHQIDSVAVVKQEKEMCYLVG RFSKTNISKLYLETL

Coding DNA - Genome Coordinates: 1933876-1933289 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGGAACTGACAAGAAGACAGGAAAAAATTTTGCATTTAATCAAAGAAAACTCTCCCATTTCAGGAGAAG ATATTGCACAGAATTTAGGTTTGACTCGCTCTGCCTTAAGAACCGATTTCTCCATTTTACGAAAAATGTC CTTGATTTCGGCAAGACAGAATTATGGATATTGTTATATCGGAGGAGAGAATAAACATAAAGTGGGACAG GTCATGGGAGAACCTAAAAAAATGGATTCTAAAAGTAGCGTCTATGAAACCATTGTATATATGTTTGAGA ATGATATTGGGAGTGTGTTTATTACAGATCATAAGGACATATTGGTGGGAGTTGTTTCCAGAAAGGATTT GTTGAAAGCGGCTTTAGGAAATAAAGATTTGGAAAAATTACCCATTCATATGGTTATGACAAGAATGCCG AATTTAATTTATGTAACGGAAGAAGATTCTATTAAAACCGCAGTAGAAAAGATTATGAAACATCAAATTG ACTCAGTCGCAGTTGTCAAGCAAGAAAAAGAAATGTGTTATTTAGTAGGAAGATTTAGTAAAACGAATAT CAGTAAACTATATTTAGAAACTTTGTAA

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