F. necrophorum 1_1_36S_FusoPortal_Gene_1836

InterPro predicted function: Autotransporter beta-domain
InterPro Accessions: IPR005546

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1836.out

Amino Acids: 1105

ORF FASTA file - Amino Acids

MNRNIINFILILAASSQLFASTTPVYKKGCSDGVLKNGSCDNFKDDPEETGMPHYQDPPL KYYVSGAVNFHQGMLHAMDETNRKNGKLSHYYTKEVDNSDFSQVKVPLYHDRISGKWFKK HEPYFFFNAGTEVKDLVFKPKEDFEKEVEKAKAENKTKMLLEGRYNTYMISGTFRDTQEE KTYGIVGEGSDEGGTKKDAKESEFYVSVEDFKKHLAILDKDGKTVIGKKSQKEINAFFAE QEKVKKAGYRLEDGKLVDKDGYEVFIDVDLVTIQNPAGSTISKADREKRDEVYSKRFVYE KTPNERLLYTTDGDLIIEDNKGMNDKDKKENGKKNEAMERSMLFLGQGLIKGTLDMGKKQ NGKERVAIFRESGIGRYGSNIVMGPESSFKNVDKIQVGGGGSSELKTGIASLTIDIDPNS RGENGALNKNALKNSSANSNGNGTNGKITFESSEGKEDYYLELMASRLGKDEIVDLGQYN DLKYISDSIAHRVIVPTVEKDKEKKESPEKEAKNTMVSIQMKDSIKRLSDEKNDLYKSIK DSGQLAKLHETLTNSNKKTRFTKKDMELMAKNDDILADAILNQKNNTDETVEKLSQFHLT EKEKEAAKKSIEGIKKNERVLEKSKEMKDVEELTKDNAFKKLLKDLKTLNEELKGMKLTS GDTSKKKEVEDKIKKICDEEDCKCLDKYKDRKYGNTKPEKYKWDNIGLDYIKIYMDMCKE DGCKDNVDLLTKAISGLLEYSETYTPEEAKKAVIKELNNGSGAFEYDRLKQILQYTIREE EALEEFKTILSQIQDTNVYSKLNKIANSEITTYTSLPFEIRHSLTGDKRIAKGGFISSRT VQSHWKGNIYTGYGLYEKNMGNGVRAGLVFGGANTNYKETYSRTAKTVSTNSDIKGVSAY AGGYINKPLYEELRWITGAGVQYGRYTVKRDMKNHYQQLSAKGNANVGAFNTYSGLILFY PLQEDVEVQVKGLLSYSFIHQGKIHENGDLNLNIQSKNYHYLDSEIGVSLNKTLYDSDRK SNLSAGISAISGLAGYKNKDLSAKVSGANSSFHIIGDKIKKDAVKILLDYNVQLDAGMTY GLEGTYITNDEESNVKIGLKAGYTF

Coding DNA - Genome Coordinates: 1945557-1942240 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGAATAGAAATATTATTAATTTCATATTAATTTTAGCAGCGAGTTCACAATTATTCGCAAGTACTACTC CTGTGTATAAGAAAGGCTGTTCCGATGGAGTATTAAAGAATGGTAGTTGTGATAATTTTAAGGACGATCC TGAGGAGACAGGAATGCCGCATTATCAAGATCCTCCTTTAAAATATTATGTAAGCGGTGCGGTTAATTTT CACCAAGGAATGCTTCATGCGATGGATGAAACCAATCGAAAAAATGGAAAACTTTCTCACTATTATACAA AGGAAGTGGATAATTCCGATTTCTCGCAAGTCAAGGTACCTTTGTATCACGACAGAATTTCAGGTAAGTG GTTTAAAAAGCATGAGCCTTATTTTTTCTTTAATGCAGGGACGGAAGTCAAAGATTTAGTATTCAAACCG AAAGAGGACTTTGAAAAAGAAGTCGAGAAAGCAAAGGCGGAGAATAAAACGAAGATGCTTTTAGAAGGTC GATACAATACGTATATGATTTCAGGAACTTTTCGAGATACACAAGAAGAAAAAACCTATGGAATTGTTGG GGAAGGCAGTGATGAAGGAGGAACGAAGAAAGATGCAAAAGAATCGGAATTCTACGTTTCCGTTGAAGAT TTTAAAAAACATTTAGCGATACTGGACAAAGACGGAAAAACCGTGATTGGAAAAAAATCTCAAAAAGAGA TTAATGCTTTTTTTGCGGAGCAGGAGAAAGTAAAAAAAGCAGGGTATCGTTTAGAAGATGGCAAGTTAGT TGATAAAGATGGATATGAAGTTTTTATTGATGTTGATTTAGTCACCATTCAAAATCCTGCCGGAAGTACT ATTTCAAAAGCGGACCGAGAAAAAAGAGATGAAGTATATTCAAAGAGATTCGTCTACGAAAAAACGCCGA ATGAAAGATTGCTATACACCACTGACGGGGATTTGATTATTGAAGATAATAAGGGAATGAATGATAAAGA CAAGAAAGAAAATGGGAAGAAGAATGAGGCTATGGAACGAAGCATGTTATTCCTTGGACAAGGACTTATC AAAGGGACTTTGGATATGGGGAAAAAACAAAATGGAAAAGAAAGAGTTGCTATTTTCCGAGAATCAGGAA TTGGACGTTATGGAAGCAATATAGTGATGGGACCGGAATCTTCTTTCAAAAATGTCGATAAAATACAAGT CGGAGGAGGAGGAAGCAGTGAATTAAAAACGGGAATTGCCTCTTTAACAATCGACATTGATCCCAACAGC AGAGGAGAAAATGGAGCATTAAACAAGAATGCTCTAAAAAATTCAAGTGCTAACAGTAATGGGAATGGAA CTAATGGTAAGATTACATTTGAAAGTTCGGAAGGAAAGGAAGATTACTATCTGGAATTGATGGCAAGCCG ACTGGGGAAAGATGAAATTGTAGACCTGGGACAATACAATGATTTAAAATATATTTCCGATTCCATTGCC CATCGTGTGATTGTTCCGACGGTGGAAAAAGATAAAGAAAAGAAAGAAAGTCCTGAAAAGGAAGCAAAAA ATACCATGGTCAGCATTCAAATGAAAGACAGTATTAAACGATTGAGTGACGAAAAAAATGATTTATATAA GAGTATCAAAGATTCCGGACAATTAGCAAAATTACATGAAACTTTGACGAACTCGAACAAAAAGACAAGA TTTACCAAAAAAGATATGGAGCTAATGGCAAAGAATGATGATATTTTAGCGGATGCAATTTTAAATCAAA AAAATAATACCGATGAGACGGTAGAGAAACTTTCTCAATTTCATTTAACGGAAAAAGAAAAGGAAGCAGC GAAAAAAAGTATTGAAGGAATAAAGAAGAATGAGAGAGTATTAGAGAAATCCAAAGAAATGAAAGATGTC GAGGAACTTACTAAGGACAATGCTTTTAAAAAATTATTAAAAGATTTGAAAACATTAAATGAAGAACTGA AAGGAATGAAACTGACAAGCGGTGATACTAGCAAAAAGAAAGAAGTAGAAGATAAGATAAAGAAAATATG TGATGAAGAAGACTGCAAGTGTTTAGATAAGTATAAAGATCGGAAGTATGGAAATACAAAACCGGAAAAA TATAAATGGGATAATATTGGTTTAGATTATATTAAAATATATATGGATATGTGTAAAGAAGACGGATGTA AAGACAATGTCGATCTGTTAACGAAGGCTATTTCAGGGCTTTTGGAATATTCAGAAACCTATACTCCGGA AGAAGCAAAAAAAGCGGTGATTAAAGAATTAAACAATGGTTCCGGTGCTTTTGAATATGACAGATTGAAA CAAATTTTGCAATATACGATTCGAGAAGAAGAAGCCTTGGAAGAATTTAAGACCATTTTGTCTCAAATCC AAGATACCAACGTATATTCTAAGTTGAATAAGATTGCCAACAGTGAAATCACAACCTATACTTCTCTTCC TTTTGAAATTAGACACTCCCTGACAGGAGATAAACGAATCGCAAAAGGTGGATTTATTTCTTCGAGAACG GTACAAAGCCATTGGAAAGGAAATATTTACACCGGGTACGGACTGTATGAAAAAAATATGGGGAATGGAG TGAGAGCAGGATTAGTATTCGGAGGAGCCAATACGAATTATAAAGAAACTTACAGTAGAACGGCAAAAAC AGTGTCTACGAATTCCGATATTAAAGGGGTCAGTGCTTATGCAGGAGGATATATCAATAAACCTTTATAT GAAGAATTACGTTGGATTACAGGAGCGGGAGTTCAGTACGGAAGATATACTGTAAAACGGGATATGAAGA ATCATTATCAACAATTGAGTGCAAAAGGAAATGCAAATGTGGGAGCTTTTAACACATACAGCGGTTTAAT ATTATTTTATCCTTTGCAAGAAGATGTGGAAGTACAAGTAAAAGGTCTTCTTTCTTACAGTTTTATCCAT CAAGGAAAGATTCATGAAAATGGCGACTTAAATCTAAATATTCAGTCTAAAAATTATCATTACCTGGATT CTGAAATTGGGGTAAGCCTAAATAAAACATTGTATGATTCGGATAGAAAGAGCAATTTATCGGCAGGAAT TTCAGCAATTTCCGGACTAGCGGGATATAAAAATAAGGATTTATCTGCAAAGGTATCCGGAGCAAATTCT TCTTTCCACATTATCGGAGATAAGATTAAGAAAGATGCCGTTAAGATTTTATTGGATTACAATGTTCAAT TGGATGCAGGAATGACTTACGGATTAGAAGGAACTTACATTACAAATGATGAGGAAAGCAATGTAAAAAT TGGCTTAAAAGCAGGATATACTTTCTAA

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