F. necrophorum 1_1_36S_FusoPortal_Gene_1871

InterPro predicted function: "Penicillin-binding protein
InterPro Accessions: IPR001460;IPR005311;IPR005543

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1871.out

Amino Acids: 654

ORF FASTA file - Amino Acids

MKKNRFHSRLTGIMYFVCILFMCIGLRLCQIQLAKKAMYRSRILNQIEAKDEEIGERGNI LDQSGKQLAFNKRQYTVIIDPSKIHINEDQFLKNLQDIAEKKILDLDASFFETLEKEFQA NKKYKVIAKKIDDVTKEKIKECLSKIPEERKYLFFKKEIEREYYRKDIYETLVGMVRFTK DSKEKKAGVFGIESRYEPYLAGKILTRSKYYSRDKKKVLPTSMEWMYTNLNGNNVYLTLD NEINYILNDEIKAQYDALNAEEAYGIIMDPQNGKILGISTYTRNPKDLRNQVFQNQYEPG SIFKPLIVAAALDEGLIQKNSTFNIGNGSIVKYRHTIRESSRTTTGILTTTEVIKKSSNV GMVLISDRFTEEQFEKSLRKFGLYDKTGVDFPNEIKPYTTPHKKWDKLKKSNMAFGQGIT VTPIQMATAFSAVVNGGKLFRPYLVEKIVDDDGVVLRRNIPKVVRQVIKPEVSEMLVGML EETVASGTGSRAKVEGYRVGGKTGTAQLSSNGRYLAHQYLASFVGFFPVENPQYVILVMI LKPQAESVFGRYGGTASAPVVGNIIRRISKIKNVSSQEVSKIISTKKETLEEKPRPVLGE EMPDLKGLSPKEVMNLFQSTNYDIHIKGTGLVVQQEPAAGKSLEEVNKIEVILE

Coding DNA - Genome Coordinates: 1986510-1984546 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGAAGAAGAATCGATTTCACAGTCGTTTGACAGGAATTATGTATTTTGTCTGTATTTTATTTATGTGTA TCGGCTTACGTCTATGTCAAATACAATTGGCAAAAAAAGCCATGTATCGTTCTCGTATTTTAAATCAAAT TGAAGCAAAAGATGAAGAAATAGGAGAAAGAGGAAATATTTTAGATCAAAGCGGAAAGCAATTGGCATTT AATAAAAGACAATACACCGTCATCATTGATCCTAGTAAAATTCATATCAACGAGGATCAGTTTTTAAAAA ATTTACAGGATATCGCGGAGAAAAAAATTTTGGACTTGGATGCTTCTTTTTTCGAAACCTTAGAAAAAGA GTTTCAGGCAAATAAAAAATATAAAGTGATTGCAAAGAAAATAGATGATGTTACAAAAGAAAAAATTAAA GAATGTCTTTCTAAAATTCCGGAAGAAAGAAAGTACCTGTTCTTCAAAAAAGAGATAGAAAGAGAATATT ATCGAAAGGATATTTATGAAACTCTGGTGGGAATGGTACGGTTTACAAAGGACTCTAAGGAAAAAAAGGC AGGAGTGTTCGGAATAGAAAGTCGTTACGAACCATATTTGGCAGGGAAAATTCTGACGAGAAGCAAATAC TATTCCAGAGATAAAAAGAAAGTACTTCCAACTTCCATGGAATGGATGTACACCAATTTGAATGGAAATA ATGTGTATTTGACACTGGACAATGAAATTAACTATATTTTGAATGATGAAATCAAAGCACAGTATGATGC TTTAAATGCGGAAGAAGCATATGGAATTATCATGGATCCTCAAAACGGAAAGATTTTGGGAATTTCTACC TACACCCGAAACCCGAAAGATCTTAGAAATCAAGTTTTCCAAAACCAGTATGAGCCGGGTTCTATTTTTA AGCCTTTGATTGTTGCAGCGGCATTGGATGAAGGATTGATTCAAAAAAACAGTACTTTTAATATTGGAAA CGGAAGTATCGTAAAATATCGTCATACCATTCGAGAAAGCAGTCGAACGACAACAGGGATTTTAACAACG ACAGAAGTGATTAAGAAATCAAGTAATGTTGGAATGGTGTTGATTAGTGATCGTTTTACAGAGGAGCAAT TTGAAAAGTCTTTACGAAAATTCGGTTTGTATGATAAAACAGGAGTGGATTTTCCAAATGAAATCAAACC TTATACCACTCCACATAAAAAATGGGATAAATTGAAGAAAAGTAATATGGCGTTTGGGCAAGGAATCACG GTAACTCCGATTCAAATGGCAACTGCATTTTCAGCAGTTGTTAACGGAGGGAAATTATTCCGACCTTATT TGGTCGAAAAGATTGTGGATGATGACGGGGTGGTCTTACGAAGAAATATTCCGAAAGTAGTTCGGCAAGT TATCAAACCGGAAGTTTCGGAAATGTTAGTGGGAATGTTGGAAGAAACCGTTGCCAGCGGAACAGGATCA AGGGCGAAAGTGGAGGGCTATCGTGTCGGTGGAAAAACGGGAACAGCACAGTTAAGCAGCAATGGTCGTT ATTTGGCTCATCAATATTTAGCTTCTTTTGTCGGATTTTTCCCTGTAGAAAATCCTCAATATGTGATTTT GGTTATGATTTTAAAACCGCAGGCGGAATCTGTTTTTGGAAGATATGGAGGAACGGCATCTGCTCCTGTT GTTGGAAATATTATTCGACGGATTAGTAAAATTAAAAATGTATCCTCTCAAGAGGTGTCTAAAATTATTT CTACGAAGAAAGAAACTTTGGAAGAAAAACCTAGACCGGTATTGGGAGAAGAAATGCCGGATCTGAAAGG TCTAAGTCCAAAAGAAGTCATGAATTTATTTCAATCGACGAATTATGATATACATATCAAGGGAACAGGA TTGGTAGTCCAACAGGAACCGGCAGCCGGGAAGTCTTTAGAAGAGGTCAATAAAATCGAGGTTATTTTAG AATGA

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