F. necrophorum 1_1_36S_FusoPortal_Gene_1901

InterPro predicted function: Mga helix-turn-helix domain;PTS EIIA type-2 domain;PRD domain
InterPro Accessions: IPR007737;IPR002178;IPR011608

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1901.out

Amino Acids: 661

ORF FASTA file - Amino Acids

MALNTKHFEILKELKKEDDLKRVADIFNQTERNIRYKIQELNENLGQEKIFIKKRKIYCL LDENDIASLIKGLNVQNYVYEQKERMDLLIIETILQEDEFQIEELADSLQMSKSTLRADI KILTEKLKKVGIHLGQYSNKKYRAQYKNNDLIYYLSIFLYNYVTFDEGRRAISFKRSNYF EKIVYEMLTKMYCSVLEDSYQKIKAIDLPYTDETLNLLILLISVLKLRKLNSEDLEVLNK KVLKETKEFKTLRKVFPELSELNIYFLTDYLLRISCDEKEIFARHRNWIEIELGVYRLIK EFESLKKVQLVKNKKLLDDILYYIKPLIYRSSKQIELKNTVLKEVKSIYGDTFFYLKKAF QSFETLLGLEVSDNEIGFLVPIFQVALRNRIRQAKRILVVSSYKRNLINFLLARLEEEFL VEIVHVISMKQLDDFQENVDLIITTSDLSQMNLKVPFCRVSPILTESDRKHLEEFELPPQ DKHISLDALMNVIERNVEGQKCNTFKMREDLLQSFPNIVVDEKAQEMKENLVIQKYQITE LDVFDWKEAVKAATEILWKHKYIKKAYMEDMLNHLEEDGLMFLLNENSALFYTEPKENVY HTGFSIVHVETPLIIRGKKIEYFVCFAPKGDAEDQNLLFQLNDFFEEENFENILKKMLRK K

Coding DNA - Genome Coordinates: 2018707-2016722 | Orientation: Reverse

ORF FASTA file - Coding DNA

TTGGCACTAAATACAAAGCATTTTGAAATTTTAAAAGAATTAAAGAAAGAAGATGATTTAAAAAGGGTTG CCGACATCTTCAATCAAACGGAAAGAAATATTCGTTATAAGATTCAAGAACTAAATGAAAATTTGGGGCA AGAGAAGATTTTTATTAAAAAAAGAAAAATATACTGTCTTTTGGATGAAAATGACATTGCTTCCCTGATT AAAGGATTGAATGTACAGAACTATGTGTATGAGCAAAAAGAAAGAATGGATCTTCTGATTATTGAAACCA TTTTACAGGAGGACGAATTTCAAATCGAAGAGCTTGCAGATAGTTTGCAGATGAGCAAATCCACCCTGCG TGCAGATATTAAAATTTTGACGGAAAAATTAAAAAAAGTGGGGATTCATTTAGGTCAATATTCCAATAAA AAATATAGAGCTCAATATAAAAATAACGACTTGATTTATTACCTATCTATCTTCTTATATAATTATGTGA CTTTTGATGAGGGAAGAAGGGCAATTTCTTTTAAGCGGAGCAATTATTTTGAAAAAATAGTCTATGAAAT GTTAACGAAAATGTATTGTTCTGTTTTGGAAGATAGTTACCAAAAAATTAAGGCTATCGATTTACCTTAT ACGGACGAAACCTTAAACTTATTGATTTTGTTGATTTCTGTCTTAAAACTTCGGAAGCTGAATTCTGAAG ACTTGGAAGTGTTAAATAAAAAAGTATTGAAAGAAACAAAAGAATTTAAAACCTTGCGAAAAGTATTTCC GGAATTATCGGAATTAAACATTTACTTCTTAACTGATTACTTACTTCGAATTTCCTGTGATGAAAAAGAG ATTTTTGCAAGACATCGAAATTGGATTGAAATAGAATTGGGAGTGTATCGCTTAATCAAAGAGTTCGAAT CTCTCAAGAAAGTGCAGCTTGTCAAAAATAAAAAATTGTTGGATGATATTTTATATTATATCAAACCATT GATTTATCGTAGTTCAAAACAAATTGAATTAAAAAATACCGTTTTAAAAGAAGTCAAATCCATCTATGGT GACACTTTCTTTTATTTGAAAAAAGCCTTCCAAAGCTTTGAAACTTTATTAGGCTTGGAAGTTTCTGATA ATGAAATCGGCTTTTTGGTTCCTATTTTTCAGGTGGCTTTACGAAATCGAATTCGACAGGCAAAAAGAAT TCTGGTGGTATCTTCTTACAAAAGAAATTTGATTAACTTTTTGTTAGCCAGATTGGAGGAAGAATTCTTA GTAGAAATTGTCCATGTGATTTCCATGAAGCAATTGGATGACTTCCAGGAAAATGTGGATTTGATTATCA CAACCTCCGATTTATCTCAAATGAATTTAAAAGTTCCATTTTGCAGAGTAAGCCCTATTTTAACGGAGTC GGATCGAAAACATTTGGAAGAATTTGAACTGCCTCCTCAAGATAAACATATTTCTTTGGATGCTTTGATG AATGTCATTGAGAGAAATGTAGAGGGACAAAAATGTAACACTTTCAAGATGAGAGAAGATTTGTTACAAA GTTTTCCAAATATTGTTGTTGACGAGAAAGCGCAAGAAATGAAAGAGAATTTGGTCATTCAAAAATATCA AATTACAGAACTCGATGTATTTGATTGGAAAGAAGCGGTGAAAGCTGCCACAGAAATATTATGGAAGCAT AAATACATCAAAAAAGCCTATATGGAAGATATGCTAAATCATTTGGAAGAAGACGGACTTATGTTTCTTT TAAATGAGAACAGCGCTTTATTTTATACGGAACCGAAAGAAAATGTATATCATACGGGATTTTCCATTGT ACATGTGGAAACACCTTTAATAATAAGAGGGAAAAAAATAGAATACTTTGTATGCTTTGCTCCGAAAGGG GATGCAGAAGATCAAAATTTGCTTTTTCAATTGAATGACTTCTTTGAGGAGGAAAATTTTGAGAATATAT TGAAAAAAATGCTAAGAAAAAAATAA

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