F. necrophorum 1_1_36S_FusoPortal_Gene_1928

InterPro predicted function: "TonB-dependent receptor-like
InterPro Accessions: IPR000531;IPR012910

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1928.out

Amino Acids: 696

ORF FASTA file - Amino Acids

MKIKKKVHKDTQKQQQRNINLERRQYDKRKAFIIANNMKKLFLLFSLIACSNLLYPEIIH LGASDIYSDTGYATNIRSTTSSPFVITAREIQEKRFASLSEILASLPGITIREGYEPEID LRGQGYSKARATIQVMIDGVPVNMLDSSHRKVPLNTVNPNQIERIEVIPGGGSVLYGNGT AGGVINILTKKHRGNFGNIGYRYGSFGDRKYDIAAGTSLGNFDFALDYSNEDKNGYRRNS PSDSDYFSARIAYNFNKNDTVALKYRGYRTEYKHYNSLNKKQVQEDRRQNGMAPGQKGST DRKLDEYSFSLHKRVGKNNDLSFHAYKLKTDIKTKSQTPKSTKIVKAEDNRSGVKIKDKL NYGNGNNIIIGAGYTNHTMFLSNIKVEKKTLESFALNTLKFGKLEFSQGLRFEKSKYQGD AAKAFGLKSGETSKTLENYGASLALNYLYSDAGNVYVKYERAFNTPAPLQTIKNINWQTY NSDAKSEKSNTYEIGFRDYILNSIVSASAYYSETANELKTVWLGSHFHDLSNFNTINYGK TKRYGFDLKAEQKFEKFRISESYSFVNAKIIKSGETASQKATEGKYIPDVPKHKFVLSTD YDFNEKFSIGASYQYQAAAYIDSRNSLGKEVKKSIVNLRVNYKFNDHFHIYAGIKNLFNA KYYDSVSYATAKPNTIYKVYNPAPSRNYYIGFDYKF

Coding DNA - Genome Coordinates: 2049892-2051982 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGAAAATCAAGAAAAAAGTTCACAAAGATACACAAAAACAGCAACAACGAAACATCAATCTTGAAAGGA GGCAATATGATAAAAGGAAAGCTTTTATCATAGCAAATAACATGAAAAAATTATTCTTACTATTTTCTTT GATTGCCTGTTCCAATCTGCTTTATCCTGAAATAATCCATCTGGGGGCAAGTGACATTTACTCTGATACC GGTTATGCGACCAATATAAGAAGTACAACCTCATCTCCCTTTGTGATAACTGCGAGAGAAATTCAGGAAA AAAGGTTTGCAAGTCTCTCTGAAATTTTGGCAAGTCTTCCGGGAATCACTATACGAGAGGGATACGAACC TGAAATTGATTTGAGAGGACAGGGATACTCGAAAGCGAGAGCAACCATTCAGGTCATGATAGACGGTGTG CCTGTCAATATGCTGGATTCTTCTCATAGAAAAGTTCCCTTAAATACTGTAAATCCGAATCAAATCGAAC GAATCGAAGTCATTCCGGGTGGAGGATCTGTTTTATATGGGAATGGAACGGCAGGCGGTGTCATCAATAT TCTTACTAAAAAACATCGAGGAAATTTTGGAAATATAGGCTATCGTTATGGAAGTTTTGGAGATCGTAAA TACGATATTGCCGCAGGAACCAGTTTAGGAAACTTTGACTTTGCTCTTGATTATTCCAATGAAGATAAAA ACGGCTACAGAAGAAATTCTCCTTCCGATTCGGATTATTTTTCTGCCAGAATTGCTTATAACTTCAATAA AAATGACACAGTTGCTTTAAAATACAGGGGATATAGAACAGAGTACAAACACTACAATAGTTTAAACAAA AAGCAAGTGCAGGAAGACAGAAGACAGAACGGAATGGCTCCCGGACAAAAAGGTTCTACTGATAGAAAAT TAGACGAATATAGTTTCAGTCTTCATAAAAGAGTAGGAAAAAACAACGATCTTAGCTTCCATGCTTATAA ACTGAAAACCGATATAAAAACAAAATCACAAACTCCAAAATCAACAAAAATTGTGAAAGCGGAAGATAAT AGATCAGGAGTAAAAATCAAAGATAAATTGAATTATGGAAATGGTAACAACATTATTATCGGTGCAGGTT ATACCAATCATACCATGTTTTTAAGCAACATAAAAGTAGAGAAAAAGACTCTGGAAAGCTTCGCCTTGAA CACATTGAAATTTGGAAAACTTGAATTTTCACAAGGATTGAGATTTGAAAAATCCAAATATCAAGGAGAT GCCGCCAAAGCTTTCGGATTAAAAAGCGGAGAAACTTCTAAAACACTGGAGAATTATGGTGCTTCCCTAG CTCTTAATTATTTGTATTCCGATGCAGGAAATGTATATGTGAAATATGAGAGAGCTTTTAATACTCCTGC CCCTTTACAAACCATAAAAAATATTAACTGGCAAACCTATAACAGTGATGCAAAATCAGAAAAAAGTAAT ACCTATGAAATCGGCTTCCGAGACTATATTCTAAATTCCATAGTCAGTGCTTCCGCTTATTATAGTGAAA CCGCAAATGAATTAAAAACAGTTTGGTTGGGTAGTCATTTCCATGATCTTTCCAATTTTAATACCATCAA CTATGGAAAGACAAAGAGATACGGATTCGATTTGAAGGCGGAACAGAAATTTGAAAAATTCAGAATTTCA GAATCCTATTCCTTTGTAAATGCTAAAATCATAAAAAGTGGGGAAACTGCCAGTCAAAAAGCAACGGAAG GAAAATATATTCCTGATGTTCCGAAACACAAGTTTGTACTTTCGACTGATTATGATTTTAATGAAAAATT CTCTATTGGGGCAAGCTATCAATACCAAGCTGCTGCATATATTGACTCTCGAAACAGCTTGGGAAAAGAA GTGAAAAAATCAATTGTGAATTTGAGAGTAAACTATAAATTCAATGATCATTTCCACATTTATGCCGGAA TTAAAAATCTATTTAATGCAAAATACTATGATTCTGTGAGCTATGCTACTGCTAAGCCGAATACAATATA CAAGGTTTACAACCCTGCACCAAGCAGAAATTACTATATAGGATTTGATTATAAATTCTAA

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