F. necrophorum 1_1_36S_FusoPortal_Gene_1978

InterPro predicted function: "SNF2-related
InterPro Accessions: IPR000330;IPR001650

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1978.out

Amino Acids: 1134

ORF FASTA file - Amino Acids

MNIYYIYHSGFAVEGKNHILIFDYYRIPKEKTEEKEYFFNKYIRQEEKKVYVFSSHSHAD HFNPEIFSWKKENPKIRYILSEDIQNVSFGEKIIWVREGDQIEIEDMKIFVYGSTDAGVS FLVSVEETLLFHAGDFHLWHWEDDTPEEENSMRKEYFRILERIKRDRHPMIDYAFLPVDP RLGKYTTEGLEAFVKEIDSLYVIPMHFWENYFVMEEAKSILEEYGIQLIPVKQAMEMIHG IFYMLKKEERGYYIDLVDSYGKKVSKEEIEMDPIYSYIPMEQEDVFFAGWDKKYERIFLE NQEELLDFLKGQNNFVREDFQKITWKEGRYSPLLCIREKNLEEGLYESQIELSEIDEDIH IITEDIAANGSFYLLQNRRTGFYELKDFVTELRFQEVEKLMTLAHKHFPDMDFRYRDYKR IETETLLLKPQILIEKIVSDNSLYLRIGAEVSNMDYKFLKDNAFEEVITLNSREKRIQFS KIDTSPVTGLVEEVLKILVKIQRELGIRQAYYLDEDYFFILPEQVAREFITKHLLQFANR YPIAGSDKLKKYNIKAVKPRITGNFHYSIDFLEGEAEIDIEGEKFSIQEVLSSYQKDSYI VLSDGTNALINKKYIEKLERIFKEGEENKVKISFFDLPIIDDIIEEKIVSDEYLLQKNFF YGMNYLKDYEVSFPKLNATLRSYQKYGYKWLSYLLEKHLGACLADDMGLGKTLQAIAILT KLHQEKKKKSLIIMPKSLIYNWQGEIEKFSPKLKVGIYYGNNRDLQVIQKQDVILTTYGT VRNDIVSLKELFFDLIILDESQNIKNIQSQTTKAVMLLQAQNRIALSGTPIENNLSELYS LFRFLNPGMFGSLEEFNATYAFPIQKENNLEAVQDLRKKIYPFILRRVKKEVLKDLPDKI EKTIYIDMNPEHKKFYEERRNYYYNMIHAGIREKGLGKVQFFILQALNELRQITSCPEIK NAYISSSKKEMLLEQISEAVENDHKVLVFTNYIGSIDTICKSLEEQEIPYLSMTGSTKDR QQLVNKFQKNEKYKVFVMTLKTGGVGLNLTAADTIFIYDPWWNKTVENQAIDRAYRLGQD RTVFSYKLILKDTIEEKILQLQELKSKLLDDVISEDNLSNKSFTEKEIEFILGK

Coding DNA - Genome Coordinates: 2106673-2103269 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGAACATATACTATATTTATCATAGTGGTTTTGCTGTGGAAGGAAAAAATCATATTTTAATTTTTGATT ATTATCGAATTCCAAAAGAAAAAACAGAGGAAAAAGAATATTTTTTTAATAAATATATCAGACAAGAAGA GAAAAAAGTATATGTTTTCTCTTCTCATAGCCATGCCGATCATTTTAATCCGGAAATCTTCTCTTGGAAG AAAGAAAATCCTAAAATACGATATATTTTAAGTGAGGATATTCAGAATGTATCTTTTGGAGAAAAGATCA TTTGGGTGCGAGAAGGTGATCAGATAGAGATAGAAGATATGAAAATTTTCGTCTACGGTTCTACGGATGC AGGAGTCTCTTTTTTGGTGTCAGTGGAAGAAACGCTTCTTTTTCATGCGGGAGATTTCCATTTGTGGCAT TGGGAAGACGATACTCCGGAAGAGGAAAACAGCATGCGAAAAGAATATTTTCGGATTCTGGAACGGATAA AACGAGATCGACATCCTATGATAGATTATGCTTTTTTACCGGTAGATCCAAGATTAGGGAAGTATACTAC GGAGGGATTGGAAGCTTTTGTAAAAGAAATTGATAGTCTATATGTGATTCCTATGCATTTTTGGGAAAAT TATTTTGTGATGGAGGAAGCAAAAAGCATTTTAGAAGAATATGGAATTCAGCTGATTCCTGTGAAACAGG CAATGGAAATGATTCATGGAATTTTTTATATGTTAAAGAAAGAAGAGAGAGGCTACTATATTGATTTGGT AGATTCTTACGGGAAGAAAGTATCCAAGGAAGAAATTGAAATGGATCCCATTTATTCCTATATTCCTATG GAGCAGGAGGACGTCTTTTTTGCCGGTTGGGATAAAAAATATGAACGGATTTTTTTGGAAAATCAGGAAG AGTTATTGGATTTTTTGAAAGGGCAGAATAATTTCGTGAGAGAAGATTTCCAAAAAATTACATGGAAAGA AGGAAGATATTCTCCGCTTCTTTGTATTCGAGAAAAAAATTTGGAAGAGGGACTTTATGAGTCGCAGATA GAGCTTTCGGAGATAGATGAGGACATTCACATTATCACGGAAGATATCGCGGCAAATGGAAGTTTTTATC TGTTACAAAATAGAAGAACGGGTTTTTATGAATTAAAAGATTTTGTAACGGAATTACGTTTTCAGGAAGT TGAAAAATTGATGACCTTGGCTCATAAACATTTTCCGGATATGGATTTTCGATATCGGGATTATAAGAGG ATAGAGACGGAAACTTTGCTTTTAAAACCGCAAATTCTGATTGAAAAGATTGTATCGGATAACAGTCTAT ACTTACGCATTGGAGCGGAAGTTTCGAATATGGACTACAAATTTTTGAAAGACAATGCTTTTGAGGAAGT GATTACTCTAAACAGTAGAGAGAAAAGAATACAGTTTTCTAAAATAGACACCTCGCCCGTCACGGGACTT GTGGAGGAAGTGCTTAAAATTCTGGTAAAGATACAGAGAGAATTGGGAATTCGTCAAGCTTATTATTTGG ACGAGGATTATTTTTTCATTTTGCCGGAACAGGTAGCGAGAGAATTTATTACCAAACATTTATTACAATT TGCCAACCGATATCCTATTGCAGGAAGCGATAAGCTAAAAAAATATAATATTAAGGCCGTCAAACCGAGA ATTACAGGAAATTTTCATTACTCGATTGATTTTTTGGAGGGAGAGGCGGAAATTGATATTGAGGGAGAAA AATTTTCCATTCAGGAGGTTCTGTCTTCTTATCAGAAAGATTCCTACATTGTTTTAAGTGACGGAACAAA CGCTCTTATCAATAAGAAGTATATCGAAAAGTTGGAACGGATTTTTAAGGAGGGAGAGGAAAATAAAGTA AAGATCTCTTTCTTTGATCTTCCTATTATCGATGATATTATTGAAGAAAAAATAGTAAGTGATGAATATT TGTTACAAAAGAATTTTTTCTATGGAATGAATTATCTAAAAGACTATGAAGTAAGCTTCCCGAAATTGAA TGCGACTCTACGAAGCTATCAAAAATACGGATATAAATGGCTTTCTTATCTGTTGGAAAAACATTTGGGT GCTTGTTTGGCAGATGATATGGGACTTGGAAAAACATTACAAGCCATTGCCATTCTTACTAAATTACATC AGGAGAAGAAGAAAAAATCGTTGATTATTATGCCGAAGAGTCTAATTTACAATTGGCAGGGAGAAATTGA AAAATTCAGTCCCAAACTGAAGGTAGGAATTTACTATGGAAACAATCGGGACTTGCAAGTCATTCAGAAA CAGGACGTCATTTTGACGACCTACGGAACGGTGCGAAATGATATTGTGTCTTTGAAAGAATTGTTCTTTG ATTTGATTATCTTGGATGAATCTCAAAATATTAAAAATATACAGTCCCAAACGACCAAAGCGGTTATGTT ATTGCAAGCTCAAAACAGAATTGCTTTGAGCGGAACTCCGATTGAAAATAATTTGAGCGAACTTTATTCC CTATTCCGTTTTTTAAATCCCGGAATGTTTGGAAGCTTGGAGGAGTTCAATGCCACCTATGCCTTCCCGA TTCAAAAGGAAAATAATCTGGAGGCGGTACAGGACTTAAGAAAAAAGATTTATCCTTTTATTCTACGGAG AGTCAAGAAAGAAGTCTTGAAAGATTTGCCGGATAAGATTGAAAAGACCATTTATATTGATATGAATCCG GAGCATAAGAAGTTTTATGAGGAGAGAAGAAATTATTACTACAATATGATACATGCCGGTATTCGAGAAA AAGGTTTGGGAAAAGTACAATTTTTTATTTTGCAGGCTCTGAATGAGTTACGTCAAATTACCAGTTGTCC GGAGATAAAAAATGCCTATATCAGTTCCAGCAAAAAAGAAATGTTGTTGGAACAAATTTCGGAAGCTGTG GAAAATGATCATAAGGTTTTAGTGTTTACAAACTATATCGGTTCCATTGATACCATTTGTAAAAGCTTGG AAGAGCAAGAAATTCCTTATTTGAGCATGACAGGGAGTACGAAGGACAGACAACAGCTGGTCAATAAATT TCAAAAAAATGAGAAGTATAAGGTATTCGTGATGACACTGAAAACAGGAGGAGTCGGACTGAATTTAACG GCTGCGGATACGATATTTATCTATGATCCTTGGTGGAATAAGACAGTAGAAAATCAGGCAATTGACAGAG CTTATCGTCTGGGACAGGACAGAACGGTTTTTTCTTACAAATTGATTTTAAAAGATACCATTGAGGAAAA AATATTGCAATTACAGGAGTTGAAAAGTAAATTACTGGACGATGTTATTTCAGAAGATAATTTGTCCAAT AAATCGTTTACGGAAAAAGAAATTGAGTTTATTTTAGGAAAATAA

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