F. necrophorum 1_1_36S_FusoPortal_Gene_1980

InterPro predicted function: "TonB-dependent receptor-like
InterPro Accessions: IPR000531;IPR012910

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1980.out

Amino Acids: 714

ORF FASTA file - Amino Acids

MKKVVFGIYSILMSSAMLGAEIDLGTQNIYSETGFETSLRSSVSSPYIVTSKKIKEKHYT RVSEILRDIPNIYIGSGGSVDMRGQGSIHSRTTVQLLIDGVPANFLDTSHINLPIDTLNP EDIERIEVIPGGGAVLYGSGTSGGVINIITKKYTGNYAKAGYQIGSYHNHKYDVAAGTSL GKFDINLSYSKNNRDGYRKKAFSDSDFFSGKLRYHFNPTDSLEFKYSYFDNKFRGVKSLT REQVEEDRRQSGLSPKDNLKNTIRKEEWNLTYDAKWTNWLEHKSNLFYQSSEIKSSDYED AIPFYQARIAMYQQMLATPGIPPMMLEKLKKQIQIWENIITNNPKMELRQGSLFKDRKFG FKMKNKFKYGENSDFILGLGYIHNKMNRNSWAYTKNTQTNQTIETITDTKIPLNKKTFEI FGLNTYRHNNWEFVQGLRFEKAKYSGKRQYKNLEYPLKDRSMNNVAANLAVNYLYSDTGN VYVKYERGFTSPAPAQLMDKIRKGGVNDYVNNDLKSEKSNSFEVGWNDYLFHSLVSADVF FSETKDEISTIFSGGHGTTFSNLNLGQTKRYGFDLKASQVFQKWTFSEAYSYIHAKIVKD KNKAYEGKYISYVPRHKFSLNADYAITPKWTLGGEYQYSSSVYLDNANKNGKDGARAVFN LQTSYEFNSHFSIYAGIKNVLNHKYYESVTAGSGQKYYSPAPERNYYAGFRYQF

Coding DNA - Genome Coordinates: 2107786-2109930 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGAAAAAAGTGGTATTTGGGATTTACAGTATCTTAATGTCCTCTGCTATGCTTGGAGCAGAAATTGATC TTGGAACACAGAATATCTATTCGGAAACCGGATTTGAAACGAGTCTTCGAAGCTCTGTTTCTTCTCCTTA TATTGTTACTTCAAAAAAAATCAAAGAAAAACATTATACCCGTGTTTCTGAAATTTTGAGAGACATTCCG AATATCTACATCGGTTCCGGCGGCAGTGTAGATATGCGTGGTCAGGGAAGTATTCATTCCAGAACAACCG TTCAACTTTTAATTGATGGAGTTCCTGCCAATTTTTTGGATACTTCCCACATCAATCTTCCTATTGATAC CTTAAATCCGGAAGATATTGAGAGAATTGAAGTGATTCCCGGAGGAGGAGCTGTCTTATATGGAAGCGGA ACTTCCGGAGGGGTCATCAACATCATTACCAAAAAATACACGGGAAACTATGCGAAGGCAGGATATCAAA TAGGAAGCTATCACAATCATAAATATGACGTAGCTGCCGGAACCTCTTTGGGAAAGTTTGATATTAACCT GAGTTATTCGAAAAATAATAGAGACGGATATCGTAAAAAAGCCTTTTCCGATTCCGATTTTTTCTCCGGG AAATTACGTTATCACTTCAATCCCACAGACAGTCTTGAATTCAAATATAGCTATTTTGATAATAAGTTCA GAGGTGTGAAATCCCTAACCAGAGAACAAGTCGAGGAAGATCGAAGGCAAAGTGGACTTTCTCCTAAAGA CAATTTGAAAAATACCATCCGAAAAGAAGAATGGAATTTGACTTACGATGCAAAGTGGACAAACTGGCTG GAACACAAATCCAATCTTTTCTATCAGTCCAGTGAAATAAAATCGAGTGATTATGAAGATGCAATCCCTT TCTATCAAGCTCGAATTGCCATGTATCAACAAATGCTTGCTACGCCGGGAATTCCTCCTATGATGTTAGA AAAACTGAAAAAACAGATACAAATCTGGGAAAATATCATAACAAACAATCCAAAAATGGAACTACGCCAA GGAAGTCTTTTCAAAGATCGAAAATTCGGTTTTAAAATGAAAAATAAATTTAAGTATGGAGAAAACAGTG ACTTTATTTTAGGTTTGGGATACATTCACAATAAAATGAATCGAAATTCTTGGGCTTATACGAAAAATAC GCAAACAAATCAAACCATAGAAACCATTACCGATACCAAAATTCCTTTAAATAAGAAAACGTTCGAAATT TTCGGATTAAATACCTATCGTCATAATAATTGGGAATTCGTTCAGGGTTTACGCTTTGAAAAAGCGAAAT ACAGCGGAAAAAGACAATATAAAAATCTGGAATACCCTTTAAAAGATCGTAGCATGAATAATGTTGCGGC AAATCTGGCTGTCAATTATCTCTATTCCGATACAGGAAATGTCTATGTAAAATATGAAAGAGGATTTACT TCTCCTGCTCCTGCACAGTTAATGGATAAAATCAGAAAAGGAGGAGTGAACGATTATGTCAATAATGATT TAAAATCTGAAAAATCAAACTCCTTTGAAGTTGGATGGAATGACTATCTCTTCCATTCTTTAGTCAGTGC TGATGTTTTTTTCAGTGAAACGAAAGATGAAATTTCTACCATATTCTCGGGAGGGCATGGGACAACATTC AGCAATTTGAACCTTGGTCAAACGAAACGATACGGTTTTGATCTAAAAGCCAGTCAAGTTTTTCAAAAGT GGACGTTCTCGGAAGCTTACAGCTATATCCATGCAAAAATCGTAAAGGACAAAAACAAGGCTTACGAGGG AAAATATATCAGTTATGTTCCAAGACATAAATTCTCTTTGAATGCTGATTATGCAATCACTCCAAAATGG ACTCTTGGAGGAGAATATCAATACAGTTCTTCCGTATATTTGGACAATGCAAATAAAAACGGGAAAGACG GAGCGAGAGCTGTTTTCAATCTTCAAACCTCTTATGAGTTCAATTCACATTTCTCTATCTATGCAGGAAT TAAAAATGTGTTAAATCATAAGTATTATGAATCTGTCACTGCAGGTTCCGGTCAAAAGTATTATAGTCCG GCTCCGGAAAGAAATTACTATGCCGGATTCCGTTATCAATTTTAA

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