F. necrophorum 1_1_36S_FusoPortal_Gene_2022

InterPro predicted function: MarR-type HTH domain
InterPro Accessions: IPR000835

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_2022.out

Amino Acids: 224

ORF FASTA file - Amino Acids

MTVNFIKVNDLLEEFYKLFYKTEDMALKRGIKCLTHTELHIIESVGHESLTMNELAERLG ITMGTATVAASKLSEKGFLNRERSQNDRRKVFVSLTDKGIKALAYHNSYHKMIMSSITEH IKGKDLDHFISVFEDILEALRSKTDYFKPLPVCDFEHGTKISVVEIKGTPIVQNYFASQG IENFTVVITKKGADKGIVILEKQDGSELQLDILDAKNLIGIKAD

Coding DNA - Genome Coordinates: 2175516-2176190 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGACTGTAAATTTTATCAAAGTGAACGATCTATTGGAAGAATTTTATAAATTATTTTACAAGACAGAGG ATATGGCTCTCAAAAGAGGAATTAAATGCTTGACACATACGGAGCTTCATATCATTGAATCCGTCGGGCA TGAATCCCTGACCATGAACGAATTGGCGGAACGTCTGGGAATTACGATGGGAACTGCCACCGTGGCGGCT TCCAAATTGTCGGAAAAAGGATTTTTAAATCGAGAACGATCCCAAAACGACAGAAGAAAAGTATTTGTTT CCTTGACCGACAAGGGAATTAAAGCTCTGGCATATCATAACAGTTATCATAAAATGATTATGTCTTCGAT TACGGAGCATATCAAAGGAAAAGATTTAGACCATTTTATTTCCGTCTTTGAAGATATTTTGGAAGCTTTG AGAAGTAAAACGGACTATTTTAAACCGTTACCGGTTTGTGATTTTGAGCATGGCACTAAAATTTCCGTAG TGGAAATTAAAGGAACTCCGATTGTTCAAAACTATTTCGCTTCACAAGGAATTGAAAATTTCACAGTGGT TATCACGAAAAAAGGTGCCGATAAGGGAATTGTCATCCTTGAAAAACAAGACGGTAGTGAATTGCAACTG GATATTCTGGATGCCAAAAATTTAATCGGAATCAAAGCCGACTAA

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