F. necrophorum 1_1_36S_FusoPortal_Gene_215

InterPro predicted function: SecY/SEC61-alpha family
InterPro Accessions: IPR002208

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_215.out

Amino Acids: 426

ORF FASTA file - Amino Acids

MTLLEKFNSKLSSIMKVPELRDRILFTLLMFLVARIGTFIPAPGVDTDRLAAMTAQNDIL GYINMFSGGAFTRVSIFALGIIPYINASIVVSLLAAIIPQIEEIQKEGEAGRNKITQWTR YLTIGIALVQGFGVCMWLQSVGLVFEPGLLFFLTTIVTLTAGTVFLMWVGEQISVKGIGN GVSLLIFLNVISRGPANIVQTIQTMSGSKFLIPVLLAVAAAGILTIMGIVVFQLGQRKIP IHYVGKGFNSRGGMGQNSYIPLKLNSSGVMPVIFASVLMMIPTVMINAIPSKYAIKTTLS MMFNQQHPVYMIVYALVIIFFSFFYTAIVFDPEKVADNLKRGGGTIPGIRPGVETVEYLE GVVTRITWGGAIFLAAISILPFAIFSALGLPVFFGGTGIIIVVGVAIDTVQQIDAHLVMR DYKGFI

Coding DNA - Genome Coordinates: 232172-230892 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGACTTTATTAGAAAAGTTCAATTCCAAGTTAAGTAGTATCATGAAAGTTCCGGAACTTCGAGACAGAA TTCTATTTACATTACTGATGTTCTTAGTGGCAAGAATAGGGACTTTTATTCCGGCACCGGGAGTAGATAC CGATAGGCTGGCAGCCATGACTGCTCAAAATGATATTCTGGGATATATCAATATGTTCTCGGGAGGAGCC TTTACTCGTGTATCTATTTTCGCACTAGGAATTATTCCTTATATCAACGCTTCTATTGTCGTTAGTTTGT TGGCAGCGATTATTCCTCAAATTGAAGAAATTCAAAAAGAGGGAGAAGCGGGAAGAAATAAAATTACCCA ATGGACAAGATATTTAACCATAGGGATTGCACTGGTACAGGGATTTGGAGTATGCATGTGGCTGCAATCC GTAGGTTTGGTTTTTGAACCCGGACTTTTATTTTTTCTAACGACGATTGTTACCTTGACGGCAGGAACTG TATTTTTGATGTGGGTAGGAGAACAAATTTCTGTCAAAGGAATTGGAAATGGAGTATCTTTGTTAATCTT CTTGAATGTTATATCAAGAGGACCGGCTAACATTGTACAAACCATACAAACGATGAGTGGCAGTAAATTT TTAATTCCTGTATTGCTTGCTGTTGCAGCAGCAGGAATTTTAACGATTATGGGAATTGTGGTCTTCCAAC TTGGACAAAGAAAAATTCCAATTCACTATGTGGGAAAGGGATTTAACAGTCGAGGAGGCATGGGACAAAA TTCGTATATTCCTTTGAAATTAAACAGTTCAGGGGTTATGCCGGTAATTTTTGCATCAGTTTTGATGATG ATACCGACCGTTATGATTAATGCCATTCCATCAAAATATGCCATTAAAACAACCTTATCTATGATGTTCA ATCAACAACATCCGGTATATATGATAGTATATGCTTTGGTGATTATCTTTTTCTCTTTCTTTTATACGGC TATTGTTTTTGATCCGGAAAAAGTAGCGGATAATTTGAAACGAGGAGGAGGAACCATTCCGGGAATTCGT CCGGGAGTGGAAACGGTTGAGTATTTAGAGGGCGTTGTAACCAGAATTACTTGGGGAGGAGCGATATTCC TAGCAGCTATTTCTATTTTACCATTTGCAATTTTTTCTGCTTTGGGATTGCCTGTTTTTTTTGGAGGAAC AGGAATTATCATTGTGGTGGGAGTTGCGATTGATACAGTACAGCAAATAGATGCTCACTTAGTAATGAGA GATTATAAAGGATTTATATAA

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