F. necrophorum 1_1_36S_FusoPortal_Gene_276

InterPro predicted function: Type II/III secretion system
InterPro Accessions: IPR004846

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_276.out

Amino Acids: 419

ORF FASTA file - Amino Acids

MCIFQKKKENKKYLFILIFSIFIREISFSQYSLPHDIEMSDSTLREVLDEIEECLPVQIK VDEDLKDPLNLFFREGQKVEEVLEMLAEITNKKVRRISSKKYQLESMSTEKEGKLKEYHL SYLRSREVCDTLKELFPSEVKVANLESRNKIIIMATDKKIQEIDKIIQEIDIEGKQVKVY SQVLDISKDLFHELGFDWLYEKPSKQKNQFSVSVLGEESAGNSGPVLGSKWNLIRQFSNA AEVLGLSFKLLEAKQDLKITSSPAILIAHGNTGEFKITEEVIVGEKKEKKKGEHTSVEPI FKEAGLILKVVPYIHQDSSVTLDISLELSDFKYRQTNQKKDWNFNSQGGSKIGRSLSTRI HVKNKETVFIGGLSRFTNRNTENKVPFLGDIPGIGHLFRSESKKEAETEMYIKIFVEVC

Coding DNA - Genome Coordinates: 279761-278502 | Orientation: Reverse

ORF FASTA file - Coding DNA

TTGTGTATTTTTCAGAAAAAGAAAGAGAATAAGAAATATCTGTTTATTCTTATATTCAGTATTTTTATAA GGGAAATATCTTTTTCCCAGTATTCTTTGCCTCATGACATTGAGATGTCCGACAGTACATTACGAGAAGT TTTAGATGAGATTGAGGAATGTTTGCCAGTTCAAATTAAAGTGGATGAAGATTTAAAAGACCCTTTAAAT TTATTTTTTCGGGAAGGACAAAAAGTGGAAGAAGTCTTGGAAATGTTGGCTGAAATTACAAATAAAAAAG TAAGACGCATATCTTCCAAAAAATATCAGTTAGAAAGTATGAGCACGGAAAAAGAAGGGAAATTGAAAGA GTACCATCTTTCTTATTTACGGAGTAGAGAGGTTTGTGATACTTTAAAAGAACTTTTTCCTTCAGAAGTA AAAGTTGCAAATCTAGAGAGTCGGAATAAAATTATTATCATGGCTACTGATAAAAAAATTCAGGAAATTG ACAAGATTATACAAGAGATAGATATAGAAGGAAAGCAAGTGAAAGTCTATTCTCAAGTATTAGATATTTC GAAGGATTTATTTCATGAATTGGGTTTTGATTGGTTGTATGAGAAACCTTCAAAACAGAAGAATCAATTT AGTGTCTCTGTACTGGGGGAAGAGAGTGCCGGAAATTCAGGTCCTGTTTTGGGGTCCAAATGGAATCTTA TACGGCAGTTTTCAAATGCAGCTGAAGTACTTGGTCTCAGTTTTAAACTCTTAGAAGCAAAACAAGATTT AAAAATTACTTCTTCTCCAGCTATTCTAATAGCACATGGAAATACGGGAGAGTTTAAAATAACAGAAGAA GTCATTGTGGGAGAAAAAAAAGAGAAGAAAAAAGGAGAGCATACTTCTGTGGAGCCCATTTTTAAAGAAG CTGGACTTATTTTGAAAGTAGTTCCCTATATTCATCAGGATTCCTCTGTGACCCTAGATATTTCGTTAGA GTTAAGTGATTTTAAATATCGACAAACAAATCAGAAAAAAGATTGGAATTTTAATTCTCAAGGAGGTTCT AAAATTGGAAGAAGTTTGTCTACTAGGATTCATGTAAAAAATAAAGAGACCGTTTTCATTGGAGGATTGA GCCGTTTTACAAACAGAAATACAGAAAATAAGGTCCCTTTTTTAGGAGACATTCCTGGAATTGGTCATTT GTTTCGAAGTGAGTCTAAAAAAGAGGCAGAAACGGAGATGTATATAAAAATTTTTGTGGAAGTTTGTTAG

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