F. necrophorum 1_1_36S_FusoPortal_Gene_285

InterPro predicted function: Type II/IV secretion system protein
InterPro Accessions: IPR001482

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_285.out

Amino Acids: 491

ORF FASTA file - Amino Acids

MMEKYLLHFIDFQEYQLIIHFFEKERTKKEVFDFKNSHHSYKKLNLLKLKDSFAFYETEN TIYYVTANKEGGDMGFETRGKRMISYLVSQHLVYFYFQYFQIYYRKFHQAYEIEKNFSIQ CIQSLIETAVLEKVSDIHLEIFEEYSQIRFRVDGKLTRIAMISSESHTTMISQIKILSKL NIVEKRLPQDGSFSLMIQKRKIDFRVSILPNIYGEKLVIRILDRNNSKFDLENLGFLTGQ LNMIRKVLSSSAGIILNCGPTGSGKTTTLYSFLEYKNKEDTNMVTIEDPVEYHLDGITQI TCKEEIGLNFSTILKSLLRQDPDIIMIGEIRDSETAELAIKAALTGHLVFSSIHAKDSIQ CIDRLCNLGISPFLIANSLLMILSQRLLRKNCFYCKVENDNTKQLLSLIGMNRQEEMKSY HSLGCSCCNYKGYSGRIGIYEIFLANEYNRNWILCRDGRTETKPQLVSLQENALEKVKLG IISLEEMIGVI

Coding DNA - Genome Coordinates: 286421-284946 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGATGGAAAAATATCTTCTTCATTTTATTGATTTTCAAGAATATCAATTGATTATTCATTTTTTTGAAA AAGAGAGAACTAAAAAAGAAGTTTTCGATTTCAAAAATTCGCATCATTCTTATAAAAAACTGAATTTATT GAAATTAAAAGACTCTTTTGCCTTTTATGAAACGGAGAACACAATTTATTATGTGACTGCTAATAAAGAG GGGGGTGATATGGGCTTTGAAACTCGAGGAAAAAGAATGATAAGTTATTTGGTATCTCAACATTTAGTTT ATTTTTATTTTCAATATTTTCAAATCTATTATAGGAAATTTCATCAAGCTTATGAGATAGAGAAAAATTT CTCAATTCAATGTATTCAAAGTCTTATAGAAACTGCTGTTTTGGAAAAAGTAAGTGATATTCATTTGGAA ATTTTTGAAGAATATTCTCAAATTCGATTTCGTGTTGATGGAAAACTGACGAGAATAGCCATGATTTCTT CAGAATCCCATACTACTATGATTTCTCAAATAAAAATATTATCAAAATTAAATATTGTTGAAAAAAGATT GCCACAAGATGGAAGTTTTTCTCTTATGATACAAAAAAGAAAAATAGATTTTAGAGTTTCTATTTTACCT AATATTTATGGAGAAAAATTGGTTATAAGAATTTTAGATCGCAATAATTCTAAATTTGATTTAGAAAATT TAGGCTTTCTAACTGGACAATTGAATATGATAAGAAAAGTCCTATCCTCAAGTGCCGGAATTATTTTGAA TTGTGGACCGACAGGTTCGGGAAAAACGACGACTTTGTATAGCTTTTTAGAATATAAGAATAAAGAAGAT ACAAATATGGTTACCATCGAAGATCCGGTAGAATATCATTTGGATGGAATAACTCAAATTACTTGTAAGG AAGAGATTGGATTAAATTTCTCTACAATTTTGAAGTCTTTATTAAGGCAAGATCCAGATATTATTATGAT TGGAGAAATTCGAGATAGTGAAACTGCTGAATTGGCAATCAAAGCAGCTTTAACAGGACATTTAGTCTTT TCAAGTATTCATGCTAAAGATTCTATACAGTGCATTGATAGACTTTGTAATTTAGGAATTAGTCCTTTTT TGATTGCAAATTCTCTATTGATGATTTTATCTCAACGATTACTCAGAAAGAATTGTTTTTACTGTAAAGT TGAAAATGACAATACAAAACAATTACTTTCTTTGATAGGAATGAATCGGCAAGAGGAAATGAAATCATAT CATTCTCTGGGATGTTCTTGTTGCAATTACAAAGGATATTCAGGAAGAATTGGAATTTATGAAATTTTTC TTGCAAATGAATATAACCGAAATTGGATTTTATGTCGAGATGGAAGAACGGAAACAAAACCTCAACTTGT TTCTTTACAAGAGAATGCTTTGGAGAAAGTAAAACTTGGAATAATTTCTCTGGAAGAAATGATAGGAGTA ATATGA

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