F. necrophorum 1_1_36S_FusoPortal_Gene_3

InterPro predicted function: "Transposase IS204/IS1001/IS1096/IS1165
InterPro Accessions: IPR002560;IPR032877;IPR029261

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_3.out

Amino Acids: 425

ORF FASTA file - Amino Acids

MSQSYLIKSLFDIQDKNITFFPLEIEKEYKYHTFSKVISAILTKDTCACPHCHSQKTVKN GFKTSKVRYLPFQNYPIIIALKKQRFLCKECHHSFTLETPIVKKYASISQILKLSVLNSL QENMSLSLIAKQHRISIPTVQRILKQGYLSYEISKKSLPKVLCFDEFKSTKDSDGAMSFL FMDGSSHKILDIVENRKLPALEDYFSRFSYQARSQVKYIVMDMYSPYIQLAKRCFPKANI VLDTFHIVQLVNRAFNQTRIREMNQEKTKNPKLYRMLKRDWKLYLQDFLTLSESRKYCHS LKQLISPSEKVDYVMSKKENLRQDYYFYQDMLYAVKRKDFRLFESYLERWKKKLSSKMQT AWKTLRKYRKYIRNTLETSYTNGALEGMNNFIKSVKRVAFGFRKFSHFRQRILIIQGIAQ INPNF

Coding DNA - Genome Coordinates: 6117-7394 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGTCTCAATCTTATTTAATCAAATCTCTTTTCGATATTCAAGATAAAAATATTACCTTTTTCCCTCTTG AAATCGAAAAAGAATACAAATATCATACTTTTTCAAAGGTAATTTCCGCTATCTTAACGAAGGATACCTG CGCGTGCCCTCATTGTCACTCTCAAAAAACTGTAAAAAATGGCTTTAAAACATCAAAAGTTCGGTATCTT CCTTTTCAAAACTATCCCATCATCATTGCCTTGAAAAAACAGAGATTTCTTTGTAAAGAATGTCACCATT CTTTTACTCTAGAAACGCCGATTGTCAAAAAATATGCTTCGATTTCACAAATCTTAAAACTCTCTGTTTT AAACAGTTTACAAGAAAATATGTCTCTTTCTTTGATTGCAAAACAACATAGAATCTCGATTCCTACCGTA CAACGAATTTTAAAACAAGGCTATCTTTCCTATGAGATTTCTAAAAAATCCCTTCCAAAAGTGCTTTGTT TTGATGAGTTTAAATCGACGAAAGATAGTGATGGAGCCATGTCTTTTCTTTTTATGGATGGAAGTTCCCA TAAAATATTGGATATTGTTGAAAATCGAAAATTACCTGCGCTCGAAGATTATTTCTCAAGATTCTCCTAT CAAGCGAGGTCTCAAGTGAAATATATTGTCATGGATATGTATTCCCCTTATATTCAACTTGCAAAACGTT GTTTTCCAAAAGCAAACATTGTACTAGACACCTTTCATATTGTTCAACTGGTCAATCGTGCTTTTAACCA AACAAGAATTCGAGAGATGAATCAAGAGAAAACGAAAAATCCAAAACTATATCGCATGCTAAAACGAGAT TGGAAACTGTATCTACAAGATTTTTTAACCTTATCAGAAAGTAGAAAATACTGTCATTCCTTAAAACAAC TCATTTCTCCCAGTGAAAAGGTAGATTATGTAATGTCTAAGAAGGAAAATTTACGACAAGATTATTATTT TTATCAAGATATGTTATATGCTGTAAAAAGAAAAGATTTTCGACTGTTCGAATCTTACTTAGAACGATGG AAGAAAAAGCTAAGCTCTAAGATGCAAACTGCTTGGAAAACACTTCGTAAATACAGAAAATATATTCGAA ACACTTTAGAAACAAGCTATACCAATGGAGCTTTAGAGGGAATGAACAATTTTATTAAATCTGTCAAACG AGTTGCATTTGGATTCCGTAAATTCTCTCATTTTCGACAGAGAATTTTAATTATACAAGGAATTGCGCAA ATCAATCCCAATTTTTAA

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