F. necrophorum 1_1_36S_FusoPortal_Gene_361

InterPro predicted function: Type IV pilus assembly protein PilM;SHS2 domain inserted in FtsA
InterPro Accessions: IPR005883;IPR003494

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_361.out

Amino Acids: 419

ORF FASTA file - Amino Acids

MEDNITKLIMDIGNSHIKLLVGEVSTDFTRIKVLQYVEVPTKGMKKSVVQSSDELSYSIQ SALRSLENPEHRELEKVTIGVGGKCIQSKTRKLFIEFEEREVQEDDLEKLYELAEECLEA GELVLKREMYNIKINNAGIVKNPIGLVANRLEANVHLIYVDREDIEKLTDAIAEAGLEIE NLYLNAYASLKSTLIDEESTKMGVALVDIGEGATDIIISKNHKIIYAKSANLGGIHFMSD IMYLFHVPEEEAREVYSAYIKGEMTEQYISASGKRFVKEDVEKIIDARIGDIATFILSTI QESGFTGYLGQGMVLTGGVASLDRLVGKINGQTGGIVRRKKPLSIRGLEKPEYKMATVLG LFLEAIEEEMELQQKRNDEEVREEQQQDELEELLGSQEAERRSSGEAMVKIKKWISYFI

Coding DNA - Genome Coordinates: 371677-372936 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGGAAGATAATATTACAAAGTTAATTATGGACATTGGAAATTCTCATATTAAACTTTTGGTGGGAGAGG TATCCACGGATTTTACGAGAATAAAAGTATTGCAATATGTAGAAGTTCCAACAAAAGGAATGAAAAAATC AGTGGTACAATCTTCAGATGAACTTTCTTATTCGATTCAAAGTGCTTTAAGAAGCTTAGAAAATCCCGAA CATAGAGAGTTGGAAAAGGTTACTATCGGAGTTGGCGGAAAATGCATTCAATCCAAGACCAGAAAGCTTT TTATTGAATTTGAAGAAAGAGAAGTGCAAGAAGATGATTTGGAAAAATTATACGAACTTGCAGAGGAATG TTTAGAAGCGGGAGAGTTGGTTTTAAAACGTGAAATGTATAACATTAAGATTAATAATGCGGGCATTGTG AAAAATCCGATTGGCTTGGTGGCAAATCGTTTGGAAGCAAATGTGCATTTAATCTATGTCGACCGAGAGG ATATTGAGAAATTGACAGATGCCATTGCGGAAGCGGGATTGGAAATTGAAAATCTTTATTTGAATGCCTA TGCTTCTCTAAAATCCACTTTAATTGATGAAGAGTCCACCAAAATGGGGGTGGCTCTGGTGGACATTGGA GAAGGGGCAACCGATATTATTATTTCAAAAAATCATAAAATTATTTATGCGAAGTCGGCAAACTTGGGAG GAATTCATTTCATGAGTGATATTATGTATCTCTTCCATGTTCCTGAAGAAGAGGCGAGAGAGGTATATTC AGCCTATATTAAAGGAGAAATGACGGAGCAATATATCAGTGCCAGCGGAAAACGCTTTGTCAAAGAAGAT GTGGAAAAAATTATTGATGCCAGAATAGGAGACATTGCCACCTTTATTTTAAGTACCATTCAAGAATCGG GATTTACAGGATACTTGGGACAAGGAATGGTGTTGACAGGAGGGGTTGCAAGTTTGGACCGTCTGGTCGG AAAAATCAACGGACAGACCGGAGGTATTGTTCGGCGTAAGAAACCCTTATCCATTCGGGGCTTGGAAAAA CCGGAATACAAAATGGCAACGGTATTAGGCTTATTCTTAGAAGCCATAGAAGAGGAAATGGAATTGCAAC AAAAAAGAAATGATGAAGAAGTGAGAGAAGAACAACAACAGGATGAGTTGGAAGAATTGTTAGGAAGTCA GGAAGCGGAACGAAGATCATCCGGAGAAGCAATGGTTAAAATCAAAAAATGGATTTCATATTTTATATAA

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